Gene YpsIP31758_1172 details

Gene Information

• Locus tag: YpsIP31758_1172
• Symbol: hscA
• ID: 5388271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1375799
• End bp: 1377733
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640864149
• Product: chaperone protein HscA
• Protein accession: YP_001400153
• Protein GI: 153948816
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTAT TACAAATTAG TGAGCCGGGT TTAACCGCGG CACCACACCA ACGTCGGCTG 
GCTGCGGGGA TCGATTTAGG TACCACCAAT TCATTGGTGG CGACCGTGCG CAGCGGTAAA 
GCGCAGACGC TGGCCGATGA ACAGTTAGCC GATGAACAGT TAATCGCTGG TGAACAGTTA 
ATAGCAGGTC AACAGCTAAT AGCAGGTCAA CAGCTAATAA ATGAAAAACA GCGGGATTTA 
CTGCCGTCAG TGGTTCATTA TCACCCACAG GGTATTGATG TTGGTTGGAA GGCGCGCAAT 
CTGGCGGCCT TGGACCCGGT TAATACCATC AGTTCAGTGA AACGCATGAT GGGCCGCTCT 
CTGGCTGATA TCGTACAGCG TTATCCCAAT TTACCTTACC AATTCCACGC GAGTGAAAAC 
GGTTTACCGA TGATCCAGAC GGCGCGTGGG TTGGTGAATC CGGTTCAGGT GTCGGCAGAG 
ATCCTCAAAA CACTGGCTCA GCGGGCGCAA GCGGCATTGG CCGGCGAGCT CGATGGCGTT 
GTCATTACCG TCCCTGCGTA TTTCGATGAT GCTCAGCGTC AGGGGACAAA AGACGCTGCG 
CGTTTGGCGG GGCTACATGT CTTACGTTTA CTGAATGAAC CCACTGCGGC AGCCATCGCC 
TATGGCCTGG ATTCCGGTCA GGAAGGGGTG ATTGCGGTTT ATGATCTGGG TGGCGGGACG 
TTTGATATCT CCATTCTGCG TTTAAGTCGT GGCGTATTTG AAGTGCTGGC AACCGGTGGT 
GACTCGGCGC TGGGTGGCGA TGATTTTGAT CACCTCTTGG CTGACTGGTT GCGTGAGCAA 
GCCGGGGTTG CGACCAGGGA TGACCACGGC ATTCAACGGC AGTTACTTGA TGCGGCAATT 
GCCGCCAAAA TTGCCTTGAG TGAGGCCGAG ACTGCGGTAG TTTCCGTGGC TGGCTGGCAA 
GGGGAGGTTA CTCGCGAGCA GCTTGAGTCG CTCATTGCTC CGCTGGTAAA ACGCACACTG 
ATGGCTTGCC GCCGCGCCTT GAAAGATGCG GGCGTCACGG CTGATGAAAT TTTGGAAGTG 
GTGATGGTCG GTGGTTCGAC CCGAGTCCCG TTGGTGCGAG AGCAGGTGGG GCAATTCTTT 
GGCCGCACGC CGTTGACCTC TATCGATCCC GATAAAGTGG TCGCCATTGG TGCCGCTATT 
CAGGCTGATA TTCTGGTGGG CAATAAACCG GACAGCGACA TGCTGCTGCT TGATGTGATC 
CCGCTCTCCT TAGGGCTGGA AACGATGGGC GGTTTGGTGG AGAAAGTGAT CCCCCGCAAT 
ACCACCATTC CGGCGGCTCG AGCGCAGGAG TTCACCACCT TCAAAGACGG TCAGAGTGCG 
ATGATGATCC ACGTGCTGCA AGGCGAGCGT GAATTGGTGA AGGATTGCCG TTCATTAGCC 
CGTTTTACGT TGCGTGGCTT GCCTCCTTTG CCTGCGGGAG GGGCACATAT TCGTGTCACT 
TTCCAGGTGG ATGCTGACGG CTTATTAAGT GTGACGGCGA TGGAGAAATC GACGGGCGTT 
GAGGCATCGA TTCAGGTGAA GCCATCTTAT GGGCTGTCTG ATGATGAAAT TGCCAATATG 
ATTAAAGATT CCATGGCGAA TGCGCAAAGT GATATCACCG CCCGTAAACT GGCGGAACAA 
CAGGTTGATG CCGCCAGAGT GCTAGAGAGC CTGCAAGGCG CACTGGCAGA AGACGCCGCG 
TTACTCAGTG AGCAAGAAAG TGCCGCGATC GCCCAAGCGG TCGCGTTATT ACAGCAGCAG 
ATGCAGGGCA GCGACCCACA AGCCATCGAA GCTGCGATCA AAGCGTTAGA TGCACAAACG 
CAAGATTTTG CCGCACGCCG GATGGACGCT TCCATTCGCC GTGCTTTAGC AGGTCATTCA 
GTGGATGAGG TTTAA 

 

Protein sequence

MALLQISEPG LTAAPHQRRL AAGIDLGTTN SLVATVRSGK AQTLADEQLA DEQLIAGEQL 
IAGQQLIAGQ QLINEKQRDL LPSVVHYHPQ GIDVGWKARN LAALDPVNTI SSVKRMMGRS 
LADIVQRYPN LPYQFHASEN GLPMIQTARG LVNPVQVSAE ILKTLAQRAQ AALAGELDGV 
VITVPAYFDD AQRQGTKDAA RLAGLHVLRL LNEPTAAAIA YGLDSGQEGV IAVYDLGGGT 
FDISILRLSR GVFEVLATGG DSALGGDDFD HLLADWLREQ AGVATRDDHG IQRQLLDAAI 
AAKIALSEAE TAVVSVAGWQ GEVTREQLES LIAPLVKRTL MACRRALKDA GVTADEILEV 
VMVGGSTRVP LVREQVGQFF GRTPLTSIDP DKVVAIGAAI QADILVGNKP DSDMLLLDVI 
PLSLGLETMG GLVEKVIPRN TTIPAARAQE FTTFKDGQSA MMIHVLQGER ELVKDCRSLA 
RFTLRGLPPL PAGGAHIRVT FQVDADGLLS VTAMEKSTGV EASIQVKPSY GLSDDEIANM 
IKDSMANAQS DITARKLAEQ QVDAARVLES LQGALAEDAA LLSEQESAAI AQAVALLQQQ 
MQGSDPQAIE AAIKALDAQT QDFAARRMDA SIRRALAGHS VDEV