Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1164 |
Symbol | |
ID | 5387163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1369160 |
End bp | 1370182 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864141 |
Product | Ni2+-Co2+ transporter (NiCoT) family protein |
Protein accession | YP_001400145 |
Protein GI | 153949371 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00000293484 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAG TTATTGCTCC GATTCCACGG CCCAAACAGC GACATTGGCT GATCAATTTA TGGCCTCTAT TGTTGTTCTT ACTCATATTG GCTAGCGCTG GGTATGTCTC CTGGCTTTAT TGGCCAGAAT TGCTGTTTAA AACAGTAGCC TGGCAAAAAA GTGTGCATCA GCAAATGGCC CAACTGTTGC AGCAAGTTAA AGCCGAACCG CATCAGGCGG GGTGGGTGCT GATGTTGTTT AGCCTGATTT ATGGCGTGTT ACATGCTGTA GGGCCGGGCC ACGGTAAAGT GGTGATTGTG ACGTATCTGG CAACCCACCC GGCGCGGTTA AAAAGCAGCC TGAAACTGAC TTTTGCCGCT TCAATATTGC AAGGTAGCGT AGCGATTCTA CTGGTAACTT TGTTACTTGG GGTATGGCAG CTCTCTTCAC GGTATCTGCA TCAAAGCAGT TTTTGGCTAG AAAAAGGCAG TTTTCTATTG GTTATTGGGT TGGGGATGTT GCTCTGTTTC CGGGCGGTAA AGCGGATCTA TCGACAAATT AACGCCTTAA AACCACAGAA AATGACTTTT CAGCAGATTC AGCCATTACC GGCTAACCAT GTGCACAGCG ACAACTGCGG CTGTGGGCAC CGTCATCTGC CCAGTGATAA AGAGCTACAA GCCGGTGGCG ATTGGCGCAC CCGTTTGACG ATTGTATTGG CGATGGGGAT GCGCCCTTGC TCCGGTGCGA TTATGGTGTT GCTGTTTTCC AAGGTGATTG GCGTTTACTG GTGGGGGATT TTGTCGGCGA TGGCGATGGC TTTAGGGACG TCGCTGACTA TCTCGCTGTT GGCACTGTTC GTCCATTATG CACGGCGCTT GGCGGTATAT TTAAGCCGTA AACGCGCCCC TGCCGCTTGG GGAGAGATTG CCTGGGCCAC GCTGGCATTA ACCGGGGGAA TTATTCTGCT GTTCGCGGGG GTTCTGTTTT ATTTGTCCAG TCAGCCGGAG ATGGTTGGGG CTGTTCGTCC ATTTGGTCGC TGA
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Protein sequence | MSVVIAPIPR PKQRHWLINL WPLLLFLLIL ASAGYVSWLY WPELLFKTVA WQKSVHQQMA QLLQQVKAEP HQAGWVLMLF SLIYGVLHAV GPGHGKVVIV TYLATHPARL KSSLKLTFAA SILQGSVAIL LVTLLLGVWQ LSSRYLHQSS FWLEKGSFLL VIGLGMLLCF RAVKRIYRQI NALKPQKMTF QQIQPLPANH VHSDNCGCGH RHLPSDKELQ AGGDWRTRLT IVLAMGMRPC SGAIMVLLFS KVIGVYWWGI LSAMAMALGT SLTISLLALF VHYARRLAVY LSRKRAPAAW GEIAWATLAL TGGIILLFAG VLFYLSSQPE MVGAVRPFGR
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