| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1146 |
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| Symbol | |
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| ID | 5387069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1345443 |
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| End bp | 1346903 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864122 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001400127 |
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| Protein GI | 153947131 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACGCA TAAAATTAAG TTACTTTACC ATCGGTCTGG TTGCTCTGCT TCTGGCGCTT
GCGCTGTGGC CCAATATTCC TTGGCGTAAT GGGCAAGAGG GCCAACTTGA CCAAATAAAA
GCCCGTGGAG AACTGCGCGT CAGTACCATC AGTTCTCCTT TGATCTACTC TACCGAAAAG
GATACCCCTT CCGGTTTTGA CTATGAGCTA GCAAAACGTT TTGCTGACTA TCTGGGGGTT
AAACTGGTTA TCATCCCCCA TCATAATATT GACGATCTGT TTGACGCATT AGATAACGAT
GACACCGATC TGCTAGCCGC TGGGCTGATT TATAACCGTG AACGCCTCAA TCGGGCGCGG
ACTGGCCCTG CCTACTATTC TGTTTCTCAG CAATTGGTCT ACCGGCTGGG TTCGCCACGG
CCTAAATCGT TCAGCGATCT GAAAGGTCAG GTGGTTGTGG CCTCCGGTTC GGCCCATATG
ACCACACTAA AACGGCTTAA GCAGACAAAA TATCCTGAAC TCAATTGGAG TTCATCCGTC
GATAAGTCCG GTAAAGAATT ACTGGAGCAA GTCGCGGAAG GTAAGCTCGA CTATACCCTT
GGCGATTCAG CCACCATTGC CCTGTTACAA CGCATTCATC CGCAATTGGC AGTCGCATTT
GATGTCACCG ATGAAGAGCC CGTCACCTGG TATTTTAAAC AGAGTGATGA CGATAGCCTG
TATGCGGCCA TGCTCGATTT CTACAGTGAG ATGGTGGAAG ACGGTAGCCT CGCACGTCTG
GAGGAGAAAT ATCTGGGCCA TGTGGGGAGT TTTGACTATG TCGATACCAA AACTTTCCTG
TCCGCTATCG ATAATGTCCT GCCTTCTTAC CAGCACCTAT TTGAAAAACA TGCAGGGGAC
ATTGACTGGA AATTGCTGGC CGTGATTGCC TATCAAGAAT CACATTGGAA CCCGCAAGCC
ACCTCCCCTA CTGGTGTTCG TGGCTTGATG ATGCTAACCC GTGCGACCGC GGACGGGTTA
GGGGTCAAGG ATAGGGTTGA CCCTGAAGAA AGCATCAGAG GCGGGGCTAT CTATTTGCAA
CGGCTGATGA AAAAACTCCC TGAAACCATC CCAGAAGATG AGCGCATCTG GTTTGCACTG
GCTGCGTATA ATTTAGGCTA TGGTCATATG CTGGATGCCC GCCGTTTGAC TAAAAATCAG
AACGGTAACC CAGACAGTTG GGTTGATGTG AAAATGCGTT TACCGATGCT AAGCCAAAAA
CGCTACTACC CAAGCACCAC TTACGGTTAT GCCCGTGGTC ATGAAGCCTA TAACTATGTC
GAGAATATTC GCCGTTATCA GGTCAGTCTG GTGGGATATT TACAGGAAAA AGAGAAAAAA
GCGGCTCAAC ATGCCGCCAT TGAGGCGGAG CTGGGCAAAA GCAACCCGGT TGTCGGCCCC
GGTTGGTCAA TCGGTGACTA A
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| Protein sequence | MTRIKLSYFT IGLVALLLAL ALWPNIPWRN GQEGQLDQIK ARGELRVSTI SSPLIYSTEK
DTPSGFDYEL AKRFADYLGV KLVIIPHHNI DDLFDALDND DTDLLAAGLI YNRERLNRAR
TGPAYYSVSQ QLVYRLGSPR PKSFSDLKGQ VVVASGSAHM TTLKRLKQTK YPELNWSSSV
DKSGKELLEQ VAEGKLDYTL GDSATIALLQ RIHPQLAVAF DVTDEEPVTW YFKQSDDDSL
YAAMLDFYSE MVEDGSLARL EEKYLGHVGS FDYVDTKTFL SAIDNVLPSY QHLFEKHAGD
IDWKLLAVIA YQESHWNPQA TSPTGVRGLM MLTRATADGL GVKDRVDPEE SIRGGAIYLQ
RLMKKLPETI PEDERIWFAL AAYNLGYGHM LDARRLTKNQ NGNPDSWVDV KMRLPMLSQK
RYYPSTTYGY ARGHEAYNYV ENIRRYQVSL VGYLQEKEKK AAQHAAIEAE LGKSNPVVGP
GWSIGD
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