| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1139 |
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| Symbol | pdxJ |
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| ID | 5386119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1340148 |
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| End bp | 1340879 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864115 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001400120 |
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| Protein GI | 153948330 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATT TGTTGCTGGG CGTTAATATT GATCACATCG CGACACTACG AAATGCACGT
GGGACCATTT ATCCCGATCC GGTTCAGGCT GCTTTTATTG CTGAGCAAGC GGGCGCTGAC
GGCATTACTG TACATTTACG TGAAGATCGC CGTCATATTA CGGATCGCGA TGTGCGTATT
CTGCGTCAGA CCATCCAGAC TCGCATGAAT CTGGAAATGG CGGTAACGGA TGAAATGGTT
GATATTGCTT GTGATATCAA ACCGCATTTT TGTTGTCTGG TACCTGAAAA ACGTCAGGAA
GTCACGACTG AAGGCGGGCT AGATGTTGCC GGTCAGGTTG ATAAAATGAC CCTGGCGGTA
GGGCGGTTAG CGGATGTTGG CATACTGGTT TCACTCTTTA TTGATGCAGA TTTTCGCCAA
ATCGATGCGG CTGTTGCCGC TGGCGCACCT TATATTGAAA TTCACACCGG TGCTTATGCT
GATGCCTCGA CCGTTCTGGA ACGTCAGGCT GAATTAATGC GTATCGCCAA AGCAGCGACC
TATGCTGCAG GCAAAGGGTT GAAAGTGAAT GCGGGTCATG GTCTGACATA CCATAATGTG
CAGCCAATAG CTGCATTGCC AGAAATGCAT GAGCTGAATA TTGGTCATGC GATCATTGGT
CAGGCTGTGA TGACAGGCCT TGCTACCGCA GTGACAGACA TGAAGGTATT GATGCGGGAA
GCGCGCCGTT AA
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| Protein sequence | MADLLLGVNI DHIATLRNAR GTIYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRI
LRQTIQTRMN LEMAVTDEMV DIACDIKPHF CCLVPEKRQE VTTEGGLDVA GQVDKMTLAV
GRLADVGILV SLFIDADFRQ IDAAVAAGAP YIEIHTGAYA DASTVLERQA ELMRIAKAAT
YAAGKGLKVN AGHGLTYHNV QPIAALPEMH ELNIGHAIIG QAVMTGLATA VTDMKVLMRE
ARR
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