Gene YpsIP31758_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1116 
Symbol 
ID5385631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1318338 
End bp1319288 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID640864092 
Productbiotin-dependent carboxylase domain-containing protein 
Protein accessionYP_001400097 
Protein GI153948195 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000000000309284 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATA TCATCCGCGC AGGCATTTAT ACCACGGTTC AAGATGCTGG CCGTGGCGGT 
TTTCGCCGCT TGGGGATCAG CCAAGGGGGA GCGTTAGATT TACCCGCGCT GAGTATGGCG 
AATATGCTGG TGGGTAACGC TAGCGATGCC GCTGGGTTAG AAATCACCCT TGGGCATTTT 
ACAGCAGAAT TTACCCAATC GGGTTGGATT GCCTTAACCG GTGCCGGTTG CGATGCCAGA 
CTTGATGAAC AGCGGCTCTG GACCGGCTGG TGCTATCCGG TTAAGGCCGG ACAACAGTTA 
AAACTCAGTG TGCCGCACCG CGGTATGCGC AGTTATCTGG CTCTTTCTGG CGGTATTATC 
GTGCCAGAAA TACTGGGTTC ACGCAGCACC GATTTGAAAG CCGGGTTTGG TGGTCATCAG 
GGGCGGTTGA TTAAAGAAGG CGACCGCCTG CCATTGGGTA AACCCACCCG TTTGCCCAGT 
GAATCTGTTG GCGTTAAACA GCTATTATTC GGTAACCGTG TCCGTGCCGT GCCGGGACCG 
GAATACCATG AATTCGATGA GGTTGCGCGG AATGCTTTTT GGCGAGAAGC CTGGCAGCTC 
AGTCCGCAAA GTAACCGCAT GGGATACCGC CTGAGTGGCC GCGAATTAAC GCGTAACACC 
ACGCGTGAAA TGCTATCTCA TGGTCTATTG CCCGGTGTGG TGCAGGTTCC CCATAACGGC 
CAGCCGATTG TATTGATGGC TGATGCACAA ACGACCGGCG GCTACCCACG GATTGCTTGC 
GTGATTGAGG CGGATCTCTA CCACTTGGCG CAAATTCGGC TGGGTGAGCC GATACATTTT 
GTACCATGTA CTGTGGAAGA AGCACTACGC GCCAAAAGAG AGCAACAGCA TTTCCTACAG 
CAAATTGAAT GGGGTTTAGA GAAGGGTTTT GTTACCCCGG AGGCCCAGTG A
 
Protein sequence
MLNIIRAGIY TTVQDAGRGG FRRLGISQGG ALDLPALSMA NMLVGNASDA AGLEITLGHF 
TAEFTQSGWI ALTGAGCDAR LDEQRLWTGW CYPVKAGQQL KLSVPHRGMR SYLALSGGII 
VPEILGSRST DLKAGFGGHQ GRLIKEGDRL PLGKPTRLPS ESVGVKQLLF GNRVRAVPGP 
EYHEFDEVAR NAFWREAWQL SPQSNRMGYR LSGRELTRNT TREMLSHGLL PGVVQVPHNG 
QPIVLMADAQ TTGGYPRIAC VIEADLYHLA QIRLGEPIHF VPCTVEEALR AKREQQHFLQ 
QIEWGLEKGF VTPEAQ