| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1112 |
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| Symbol | phrB |
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| ID | 5388180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1313691 |
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| End bp | 1315154 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864088 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_001400093 |
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| Protein GI | 153947154 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.196695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACGC ATCTGGTCTG GTTCCGCAAT GATTTACGGG TCACCGATAA TTTGGCGCTT
CATGCGGCCT GTCAGGACCC ACAAGCGAGC GTAATTGCCG TGTTTATTGC CACACCCGTG
CAATGGGCTG CACATGTTAT GGCACCCAGG CAGGCGGCTT TCCTGCGACA AAATTTACAA
CATTTGCAGG CAGCTCTCTC GGCTCGAGGG ATACCGCTGC ATTATCACCA ATGTGATGAT
TTTCAGGCGT CAAATACTTG GCTGGTCGAT TTTTGTCAGC AACAGCAGGT CGATAGCCTG
TTTTATTCTC AACAGTATGA ACTGAACGAG CGGTTACGTG ACGATGCGCT GGCGGTGCAA
CTCAGTGAGC GAGCTATCAC CTGCCAGTCT TTTCATGACA GTGTATTGCT CGCGCCGGGG
ACGGTTCTGA CCGGTAATAA TGAAATGTAT AAAGTGTTTA CGCCTTTTCG CCGTGCGTTT
ATTCAGCGTT TATTGATGAG TGATAACCAC TGTGTTCCAG CCCCGAAAGC CCGCCATGCT
CCTCCCGTTC TGCTCTCACC GTTGCCTTTT GATTACCCAC AGCAGTCCGT TGATAGCCAG
TTATTTCCTG CAGGGGAAGA CGCTGCCTTA CAGCGTTTAC GCCGTTTTTG TCGTGAACAG
GTACAGGATT ACCGGCAATA CCGCGATTTG CCGGCGGTGC CCGGTACCAG TTGCTTATCC
CCTTATTTGG TGTTGGGGGT CCTTTCACCG CGTCAATGTT TTAATCGCCT GTGGGCTGAA
TCCCCAGAAA TGTTAGAGAA CGCAGACAGT GGTGCATTCA CTTGGCTTAA TGAGCTAATC
TGGCGTGAGT TTTATCGCCA TTTATTAGTG GCCTATCCCC GTTTATGCCA ACATCATCCC
TTTATTGGCT GGACTGATGG GTTAGTATGG AACCGATCTG AATCGCAATT GAAAGCCTGG
CAGCAGGGGC AAACCGGTTA TCCCATCGTT GATGCCGCGA TGCGTCAAAT GAATGAAACT
GGCTGGATGC ATAATCGCCT TCGCATGATC AGCGCCAGTT TTTTGGTTAA AGACCTGTTG
ATCGACTGGC GGCAAGGTGA GCGTTATTTT ATGTCACAAT TGGTGGATGG GGACTTAGCC
GCGAATAATG GCGGCTGGCA ATGGGCCGCA TCAACCGGTA CCGATGCCGC ACCGTATTTT
CGTATTTTTA ATCCCACCAC GCAGGGCGAG CGGTTTGATA AGGACGGGGT ATTTATTCGT
CGTTGGTTAC CGGAGCTGGC TGCGGTACCA GACAGTGATA TTCATCAGCC ATGGCGCTGG
GCAGAACGGC AACAGCAGCA TCTGGATTAT CCTGTCCCGT TGGTTGATCA CAAGCAAGCC
AGATTGGCTA CACTCGCGGC ATTTGAAGCC GCTAAGCGGG ATAGCACAAG GATCCCTAAT
CGCAAGGAGC CTTCATGTTA TTGA
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| Protein sequence | MSTHLVWFRN DLRVTDNLAL HAACQDPQAS VIAVFIATPV QWAAHVMAPR QAAFLRQNLQ
HLQAALSARG IPLHYHQCDD FQASNTWLVD FCQQQQVDSL FYSQQYELNE RLRDDALAVQ
LSERAITCQS FHDSVLLAPG TVLTGNNEMY KVFTPFRRAF IQRLLMSDNH CVPAPKARHA
PPVLLSPLPF DYPQQSVDSQ LFPAGEDAAL QRLRRFCREQ VQDYRQYRDL PAVPGTSCLS
PYLVLGVLSP RQCFNRLWAE SPEMLENADS GAFTWLNELI WREFYRHLLV AYPRLCQHHP
FIGWTDGLVW NRSESQLKAW QQGQTGYPIV DAAMRQMNET GWMHNRLRMI SASFLVKDLL
IDWRQGERYF MSQLVDGDLA ANNGGWQWAA STGTDAAPYF RIFNPTTQGE RFDKDGVFIR
RWLPELAAVP DSDIHQPWRW AERQQQHLDY PVPLVDHKQA RLATLAAFEA AKRDSTRIPN
RKEPSCY
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