Gene YpsIP31758_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1108 
SymbolkdpA 
ID5385419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1310339 
End bp1312027 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content54% 
IMG OID640864084 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_001400089 
Protein GI153949779 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGT CAGGATTTCT GCTTATTGCC AGCTTCATGG TGGTGTTGTT CGTGTTGTCC 
CGTCCGTTGG GTGGGTTTTT AGCACGTTTG ATTGAAGGTG AGCCCTTCTC TGCACTGCAA
AAAGTCGAGG CCGGTTTATG GCGTTGCAGT GGGGTGAAAA ATGCAGAGAT GAACGGCTGG
CAATATGCTC TCGCGATTCT CTGCTTTAAC CTGCTGGGGA TCGTCTTGCT GTTTGTGCTG
CTCATGGCCC AAGGGTCATT GCCGCTGAAC CCCGAACATC TGCCGGGGAT GTCATGGCAT
CTGGCACTCA ATACCGCGGT CAGTTTTGTG ACTAACACCA ATTGGCAAGC GTACAGCGGT
GAGAACACCC TCAGTTATCT GAGCCAAATG GCGGGGCTAA CCGTACAGAA TTTCCTTTCC
GCTGCCACTG GTATTGCCGT CGCCTTTGCA CTGATCCGTG CCTTTGCACG CCATTCAGCC
ACCACACTGG GCAATGCTTG GGTCGATCTG GTCCGCATCA CGCTGTATGT CTTACTCCCT
ATCGCCTTGA TCATCGCCCT TATTTTTGTC AGTCAGGGCG TATTGCAAAA TCTGGATGGC
TACCTGCATA TCACCACACT GGAAGGCGTG CAACAGACCT TACCCATGGG CCCCGTAGCG
TCGCAGGAAG CCATAAAAGT GCTGGGAACC AATGGCGGCG GTTTCTTTGG TGCAAACTCA
GCCCATCCGT TTGAAAACCC GACTGCATTC AGTAATTTTG TCCAAATGCT GGCCATTTTT
CTGATCCCTT GCGCACTCTG TTTTGCCTTC GGGCAGGTCG TCGGCGATAA CCGTCAGGGG
CACGCTCTTA TCTGGGCCAT GTCGCTTATT TTTATCGTTG CTGTGGTAGT GGTGATGTAC
GCCGAACTGG CGGGAAATCC GCATTTATCC CCGTTAGGGG CTGACAGCAA TAGCAATATG
GAAGGTAAAG AGTCGCGCTT CGGTATTCTC GCCACCAGCC TGTATGCCGT AGTAACCACC
GCCGCCTCCT GTGGTGCGGT TAACGCGATG CATGACTCCT TCACTGCATT GGGTGGCATG
ATCCCCCTGT GGTTGATGCA GATTGGTGAG GTGGTGTTTG GCGGCGTTGG TTCCGGTTTA
TACGGCATGC TGCTGTTCGT GCTGCTGACT GTCTTTATTG CCGGTCTGAT GATTGGCCGC
ACACCTGAAT ATCTGGGTAA GAAAATCGAC GTATTTGATA TGAAAATGAC CGCACTGGCC
ATTTTGGTGA CCCCCACTAT CGTGCTGTTA GGGACGGCGT TAGCACTCTG CACAGAGGCT
GGACGGGCGG GGATCCTCAA CCCCGGTGCG CACGGTTTTA GTGAGGTGCT GTACGCCCTC
TCCTCGGCGG CCAATAACAA CGGCAGCGCT TTTGCGGGTC TGAGTGTCAA CACCCCGTTT
TATAACCTGC TGCTGGCCGC CGCCATGTTT ATCGGGCGCT TTGGCGTCAT TCTGCCGGTG
CTGGCCATTG CCAGTTCACT GGTGGCGAAG AAACGGCAAC CTGCGGGTAA CGGCACCCTG
CCAACGGGTG GGCCGTTGTT TATCGGTTTA CTGATCGGAA CCGTCTTATT AGTGGGCGCA
TTGACCTTTA TCCCAGCCTT GGCCCTGGGG CCGGTCGCTG AACATCTACA AGTCTGGTTA
GCACATTGA
 
Protein sequence
MAASGFLLIA SFMVVLFVLS RPLGGFLARL IEGEPFSALQ KVEAGLWRCS GVKNAEMNGW 
QYALAILCFN LLGIVLLFVL LMAQGSLPLN PEHLPGMSWH LALNTAVSFV TNTNWQAYSG
ENTLSYLSQM AGLTVQNFLS AATGIAVAFA LIRAFARHSA TTLGNAWVDL VRITLYVLLP
IALIIALIFV SQGVLQNLDG YLHITTLEGV QQTLPMGPVA SQEAIKVLGT NGGGFFGANS
AHPFENPTAF SNFVQMLAIF LIPCALCFAF GQVVGDNRQG HALIWAMSLI FIVAVVVVMY
AELAGNPHLS PLGADSNSNM EGKESRFGIL ATSLYAVVTT AASCGAVNAM HDSFTALGGM
IPLWLMQIGE VVFGGVGSGL YGMLLFVLLT VFIAGLMIGR TPEYLGKKID VFDMKMTALA
ILVTPTIVLL GTALALCTEA GRAGILNPGA HGFSEVLYAL SSAANNNGSA FAGLSVNTPF
YNLLLAAAMF IGRFGVILPV LAIASSLVAK KRQPAGNGTL PTGGPLFIGL LIGTVLLVGA
LTFIPALALG PVAEHLQVWL AH