| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1075 |
|---|
| Symbol | yntE |
|---|
| ID | 5386425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1279798 |
|---|
| End bp | 1280463 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640864051 |
|---|
| Product | nickel ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001400056 |
|---|
| Protein GI | 153948485 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGTG TCGAGAATCT GACCATCGTT CAAAGCGGAA AGCGGCTCTG GGAGTCGGTA
TCCTTCACTT TGGCACCAGG GGAACGATTA GGTATCTCAG CACCCAGTGG CTTTGGTAAA
ACGACGCTGG GCCGGGTATT AGCACAATGG CAGTCGGCAA CTGCGGGTCA TATCCTGTTA
GAGGGGAAAC CATTAGCTAA AAAAGGATAT TGTCCGGTCC AACTGGTTCC TCAGCACCCA
GAGCAAAGTT TTAATCCTTA TCGCACCACC GGTGAGAGCC TACATGATGC CTGGCGGCCC
GATGCTGATT GGTTGGCGCG GATGGCGGTT AATCCTGATT GGCTGCAACG CAGGCCGGAT
GAATTATCGG GTGGTGAATT GGCCCGCATT GCTTTGTTAC GCGCGCTGGA TCCACGGACG
CGTTATTTGA TTGCGGATGA GGTTACCGCA CAATTAGACG CCCGTATTCA GGCTCAAATT
TGGCAAGTTT TATTGGAAGA AGCTGAACAC CGTCGATTAG GGCTCATTGT TTTTAGCCAT
AATAAGGCAT TATTAGAAAA AGTGTGTTCA CGTATTTGGA TCCCTGAAAG AGAAAGTAAA
ACTACAATTT ATCCAACGCC ATTGGTTAAA CCCCATTTGG GGTTAGCAAT GGTAAAAACG
GGTTAA
|
|---|
| Protein sequence | MLSVENLTIV QSGKRLWESV SFTLAPGERL GISAPSGFGK TTLGRVLAQW QSATAGHILL
EGKPLAKKGY CPVQLVPQHP EQSFNPYRTT GESLHDAWRP DADWLARMAV NPDWLQRRPD
ELSGGELARI ALLRALDPRT RYLIADEVTA QLDARIQAQI WQVLLEEAEH RRLGLIVFSH
NKALLEKVCS RIWIPERESK TTIYPTPLVK PHLGLAMVKT G
|
|---|
| |