| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1074 |
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| Symbol | yntD |
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| ID | 5385727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1278999 |
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| End bp | 1279805 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640864050 |
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| Product | nickel ABC transporter, ATP-binding protein |
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| Protein accession | YP_001400055 |
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| Protein GI | 153948789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAT TTGACCAATT TGCTATTGAT GTCGCTCATT ATCGTTGGTT GGGCCGGAAA
ACCTGGCACC CGTTGTTGAG CCATATTTCT CTGGATGTGA ATCCGGGGGA ATTGGTGGCA
TTGGTCGGCG GGAGTGGAGA GGGTAAGAGC TTGTTACTCC AAAGTGTCTT GGGTTTATTG
CCGGAGAATA TGCGGTGCCA TGGCGAGATT ATCCTCGATG GTGAGGTACT GTGCGCCCGC
GATAAAATTG AGCAGCGGGG TAAAACCTTA TGTTATGTCC CCCAAGGCGT CAGTGCTCTG
AACCCACTGA TTAAAGTTGG CTCACAAATC ACCCGAGCAG CGCAACTCAG TGGTGTAAAA
CTGCGTTTGG AAGATGTCGC CATGCAGTTG AAAACTTATA ATCTTGCGCC GGGGCTGGTA
AATGATTTCC CGCGTCAGCT CTCAGGCGGC ATGGCGAAAC GGGTGCTGAC CAGTTGCGCG
ACCTTGACCC ATGCCCGCTA TATTCTGGCC GATGAAGTGA CCTCATGGCT AGATGAAGAC
CATGCTTGCC AGTTACTGAC GCATCTGCGT GCTTTTTGTC AGCAGGGGCG CGGTATTCTG
TGGGTAACCC ATGATTTAGC GTTGGCCGCA CGTTTTGCCG ATAAAATTGC GGTGTTACAT
AAAGGTGAGT TGCACGAAAC ATTGAGCGCT GACGAACTGA AAAATAGCGG TGGTAGCCCA
TGGTTGCAGT CACTCTGGGC CGCATTACCG GAACAGCAAT TTGTCAGCAA GCCAATCCCA
CTGGCTGAGG TGGCCGACTA TGCTTAG
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| Protein sequence | MLRFDQFAID VAHYRWLGRK TWHPLLSHIS LDVNPGELVA LVGGSGEGKS LLLQSVLGLL
PENMRCHGEI ILDGEVLCAR DKIEQRGKTL CYVPQGVSAL NPLIKVGSQI TRAAQLSGVK
LRLEDVAMQL KTYNLAPGLV NDFPRQLSGG MAKRVLTSCA TLTHARYILA DEVTSWLDED
HACQLLTHLR AFCQQGRGIL WVTHDLALAA RFADKIAVLH KGELHETLSA DELKNSGGSP
WLQSLWAALP EQQFVSKPIP LAEVADYA
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