| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1063 |
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| Symbol | |
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| ID | 5387012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1268605 |
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| End bp | 1270755 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640864039 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001400044 |
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| Protein GI | 153949726 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.294535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAACGA CAAAACTGAA CGTCATCGAT TCATCCGACA GTGAGCTGGA TTATCACTCA
CTGAATGCAA TGCTGAACCT TTATGATGCT GATGGGCGTA TCCAGTTTGA TAAAGACCGG
CTGGCCGCAC GGCAATACTT TTTGCAGCAC GTTAATCAAA ACACGGTGTT CTTCCATAAT
CTACAGGAAA AAATTGATTA CCTGATTGAG GAGGGATATT ACGAAAAAGA GGTTCTGGAT
CAATACGATT TTAGCTTTAT CAAAAGTCTA TTCCAGCAAG CCTATAGCAA AAAATTTCGT
TTCCCCACTT TTCTCGGGGC GTTTAAATAT TACACCAGCT ACACCCTAAA AACCTTTGAT
GGCAAACGTT ACCTGGAACG CTATGAAGAT CGCGTTTGCA TGGTCGCACT GACACTGGCT
ACAGGTAACC AGACACTGGC GCGGGAACTG GTAGAAGAAA TTATCTCTGG CCGCTTCCAA
CCCGCCACAC CAACCTTCCT CAATTGTGGC AAAAAACAAC GTGGTGAACT GGTCTCCTGC
TTCCTGTTGC GTATCGAAGA CAATATGGAA TCCATTGGCC GCTCGATTAA CTCGGCACTG
CAACTCTCTA AACGTGGCGG AGGCGTGGCG TTCCTGCTCA GCAATATCCG TGAGGTGGGT
GCTCCCATCA AACGGATTGA AAATCAGTCT TCGGGTGTTA TCCCGATAAT GAAAATGTTG
GAGGACGCGT TCTCCTATGC CAATCAGTTG GGTGCCCGTC AGGGGGCGGG GGCGGTCTAT
CTCCATGCCC ATCATCCAGA TATTTTGCGT TTTCTGGATA CCAAGCGGGA AAATGCCGAT
GAAAAAGTAC GGATTAAGAC CTTATCGTTG GGGGTGGTGA TACCGGATAT CACTTTTGAA
CTGGCGAAGA ATAATGAAGA AATGTACCTG TTTTCACCTT ATGACATTGA ACAGGTTTAC
GGCGTGCCTA TGTCTGAAAT CAGCATCAGC GAAAAATACC GCGAAATGGT GGATAACAAA
CGCATCCGCA AAAGCAAAAT TAAAGCCCGC GAGTTCTTCC AAATTCTGGC TGAGATCCAA
TTTGAATCTG GCTACCCTTA TATGATGTTT GAAGATACGG TTAATCGCGC TAATCCGATT
AAAGGCCGGA TTAATATGAG TAATTTGTGT TCGGAAATTT TGCAGGTCAA CGCCCCCACT
GAATACCACG AAGACCTCAG CTATCGCCAT ATCGGGAAAG ATATCTCCTG TAATCTTGGC
TCGCTGAATA TCGCGCAGGT GATGGATTCA CCCGATTTTG GTAAATCCAT TGAGATCGCC
ATTCGTGGGC TCACTGCCGT ATCTGAAATG AGCAATATTC GCTCAGTGCC ATCCATTGAA
AAAGGCAATC AAGAATCACA TGCCATTGGC CTTGGGCAGA TGAACCTGCA CGGTTATCTG
GCGCGGGAGC GTCTTTTTTA CGGCTCAGAA GAGGCGTTGG ATTTTACCAA TATCTATTTT
TATACCGTGG CGTATCACGC GATCCGTGCC TCAAACCAGT TGGCAATAGA ACGGGCCAGC
CATTTCAAAG GCTTCGATGA ATCAGATTAT GCTTCGGGTG CTTTCTTCAG CAAATATATC
GAGCAAAGCT GGCAGCCAAA AACAGCAAGA GTACAGGCAC TGTTTGCCGA TGCCGGTATT
GCCATACCAA ACCAACAAGA TTGGATCGCG CTACGGCAAT CCGTTATGGA ACACGGTATT
TATAATCAGA ACCTACAGGC GGTGCCACCA ACAGGCTCTA TTTCCTATAT CAATCATTCG
ACATCAAGTA TCCACCCGAT TGTCTCTCCG ATTGAGATCC GTAAAGAAGG CAAAATAGGC
CGTGTTTATT ATCCCGCACC CTATATGACC AACGATAACC TTGAATATTA TCAAGATGCC
TACCAGATCG GGCCTGAAAA AATCATCGAT ACCTATGCCG CAGCGACCCA ACATGTTGAT
CAGGGCCTCT CTCTGACGCT GTTCTTCCGT GATACCGCTA CCACCCGCGA TATTAACAAA
GCACAGATTT ACGCTTGGAA GAAAGGGATC AAGACCATTT ATTACATCCG GCTACGTCAG
ATGGCATTAG AGGGAACCGA AGTCGAGGGC TGCGTTTCCT GTTCGCTGTA A
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| Protein sequence | MATTKLNVID SSDSELDYHS LNAMLNLYDA DGRIQFDKDR LAARQYFLQH VNQNTVFFHN
LQEKIDYLIE EGYYEKEVLD QYDFSFIKSL FQQAYSKKFR FPTFLGAFKY YTSYTLKTFD
GKRYLERYED RVCMVALTLA TGNQTLAREL VEEIISGRFQ PATPTFLNCG KKQRGELVSC
FLLRIEDNME SIGRSINSAL QLSKRGGGVA FLLSNIREVG APIKRIENQS SGVIPIMKML
EDAFSYANQL GARQGAGAVY LHAHHPDILR FLDTKRENAD EKVRIKTLSL GVVIPDITFE
LAKNNEEMYL FSPYDIEQVY GVPMSEISIS EKYREMVDNK RIRKSKIKAR EFFQILAEIQ
FESGYPYMMF EDTVNRANPI KGRINMSNLC SEILQVNAPT EYHEDLSYRH IGKDISCNLG
SLNIAQVMDS PDFGKSIEIA IRGLTAVSEM SNIRSVPSIE KGNQESHAIG LGQMNLHGYL
ARERLFYGSE EALDFTNIYF YTVAYHAIRA SNQLAIERAS HFKGFDESDY ASGAFFSKYI
EQSWQPKTAR VQALFADAGI AIPNQQDWIA LRQSVMEHGI YNQNLQAVPP TGSISYINHS
TSSIHPIVSP IEIRKEGKIG RVYYPAPYMT NDNLEYYQDA YQIGPEKIID TYAAATQHVD
QGLSLTLFFR DTATTRDINK AQIYAWKKGI KTIYYIRLRQ MALEGTEVEG CVSCSL
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