| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1060 |
|---|
| Symbol | proW |
|---|
| ID | 5386130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1264511 |
|---|
| End bp | 1265677 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640864036 |
|---|
| Product | glycine betaine transporter membrane protein |
|---|
| Protein accession | YP_001400041 |
|---|
| Protein GI | 153949330 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC AAATTCAGGT GAACGAACAA ACAGTCAATA ATCCGTGGGC AACTGATACG
GCAACATCAG TCGCTCCCAC GGTTACCGAT AGTGCACCTC AGAGCCTGTC AGCCGCTGCT
GACCCATGGG GAGCAAGCAT GGCCGAGGGG AGCAATAGCG TAGGGTCTGC AACGCATGAG
GCGGCGTCTC AGGCCGCACA AAATACCGAT TGGTTGAACA GCGCACCTAC CCCAGCACCA
GAACATTTCA GCCTGATGGA CCCGTTCCAG AATACGTGGA TCCCACTGGA CTCGTGGGTT
ACCCAAGGTA TTGATTGGGT CGTTCTGCAC TTTCGTCCGC TGTTTCAGGG GATCCGCGTA
CCGGTTGATT TTATCCTCAG CGGCTTTCAG ACATTGTTAC TGGGGATGCC CGCACCCGTA
GCGATTTTAG TTTTCGCCCT GATAGCCTGG CAGTTTTCCA CGCTCAGTAT GGGCGCGGCA
ACCTTGATAT CACTGATTGC CATCGGTGCT ATCGGCGCAT GGTCGCAGGC CATGGTGACC
TTGGCACTGG TTCTGACCTC CCTGTTCTTC TGTATTCTGA TTGGGCTCCC CCTCGGAATC
TGGCTGGCGC GCAGCAATAA TGCCGCCCGG ATTATTCGGC CCTTACTGGA TGCAATGCAG
ACCACACCCG CGTTCGTCTA TCTGGTCCCC ATCGTTATGC TGTTCGGTAT CGGTAACGTC
CCCGGTGTCG TGGTGACGAT TATTTTTGCC CTGCCCCCTA TTGTCCGCCT GACCATTCTC
GGCATCAAAC AAGTACCGGA AGATCTGATT GAAGCAGCGG AGTCCTTTGG TGCCAACCCG
CGTCAGTTGC TGTTCAAAGT ACAGCTACCG CTGGCGATGC CAACCATTAT GGCTGGGGTG
AACCAAACGT TGATGCTGGC ATTGTCCATG GTGGTTATCG CTTCAATGAT TGCGGTGGGT
GGTTTAGGTC AGATGGTCCT GCGCGGTATT GGTCGTCTGG ATATGGGGCT GGCTGCCGTA
GGCGGCGTCG GTATTGTGAT CCTCGCCATT ATTTTGGATC GCTTAACCCA ATCATTAGGT
CGTGATCGCC GCAGTAAAGG CACTGGTCGC TGGTATACCA CAGGGCCTGT TGGGTTGCTC
ACCAAACCCT TCTGTAACAG CAAATAA
|
|---|
| Protein sequence | MSDQIQVNEQ TVNNPWATDT ATSVAPTVTD SAPQSLSAAA DPWGASMAEG SNSVGSATHE
AASQAAQNTD WLNSAPTPAP EHFSLMDPFQ NTWIPLDSWV TQGIDWVVLH FRPLFQGIRV
PVDFILSGFQ TLLLGMPAPV AILVFALIAW QFSTLSMGAA TLISLIAIGA IGAWSQAMVT
LALVLTSLFF CILIGLPLGI WLARSNNAAR IIRPLLDAMQ TTPAFVYLVP IVMLFGIGNV
PGVVVTIIFA LPPIVRLTIL GIKQVPEDLI EAAESFGANP RQLLFKVQLP LAMPTIMAGV
NQTLMLALSM VVIASMIAVG GLGQMVLRGI GRLDMGLAAV GGVGIVILAI ILDRLTQSLG
RDRRSKGTGR WYTTGPVGLL TKPFCNSK
|
|---|
| |