Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1059 |
Symbol | proX |
ID | 5386832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1263459 |
End bp | 1264463 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864035 |
Product | glycine betaine transporter periplasmic subunit |
Protein accession | YP_001400040 |
Protein GI | 153950715 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACGA CAGGAATCTG GGCCTTGGCC CTCACCACAC TGATCAGCTC TCAGTTATCC GCAGCAGAAT TGCCGGGCAA AGGTATCACC GTCCAGCCTC TGCAAAGCAC CATTTCGGAA GAAACCTTCC AGACCTCGCT GGTCAATAAA GCGTTGGAAA AACTCGGTTA CGACGTCCAA CCCACGAAAG AAGTCGATTA CAATGTCGCC TACTCCTCCA TTGCTGCAGG TGATGCAACC TATCTGGCGG TAAATTGGGT GCCACTGCAT AACGATCAAT ATAATGCAGC CGGTGGTGAT GCTAAATTTT ACCGGCAGGG TAACTATATT GAAGGCTTGG CACAGGGTTA TCTGATCGAT AAAAAAACAG CCGACCAATA CAACATCACC AATATTGCAC AGTTAAAAGA CCCGAAAATA GCCAAATTGT TTGATGCCAA TAATGATGGC AAAGCCGATC TGACCGGCTG TAACCCCGGC TGGGGTTGTG AGGCCCCAAT TAACCATCAG ATCAAAGCTT ACGGCCTGAG CGATACGGTG ACCCATAATC AGGGTAACTA TGCCGCCATG ATTGCCGATA CCATTACCCG TTACAAAGAA GGCAAGCCCA TTCTGTATTA CACTTGGACG CCTTATTGGG TCAGTGACGT ATTGGTGCCG GGCCGTGATG TCGTGTGGCT ACAAGTTCCC TTCTCTTCCT TGCCAGACAA AACTATCGAT ACCCAGCTTT CTAATGGCGC GAACTATGGT TTCCCACCTA GCGTCATGCA TATTGTGGCG AACAAAAAAT GGGCTGAAGC CAATCCGGCC GCCGCCAAGC TTTTCTCTAT CATGAAATTA TCTATTAATG ATGTGAATGC TCAAAACATG CGGATGCACA GTGGTGAATC CTCAGATGCC GATATTGAAC GCCATGTAAA TGGCTGGATC AACGCTCATC AGGCGACCTT CGATGGTTGG GTAAAAACCG CGGCTGAAGC GGCTAATTCC CAAACGGCGC AGTAA
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Protein sequence | MRTTGIWALA LTTLISSQLS AAELPGKGIT VQPLQSTISE ETFQTSLVNK ALEKLGYDVQ PTKEVDYNVA YSSIAAGDAT YLAVNWVPLH NDQYNAAGGD AKFYRQGNYI EGLAQGYLID KKTADQYNIT NIAQLKDPKI AKLFDANNDG KADLTGCNPG WGCEAPINHQ IKAYGLSDTV THNQGNYAAM IADTITRYKE GKPILYYTWT PYWVSDVLVP GRDVVWLQVP FSSLPDKTID TQLSNGANYG FPPSVMHIVA NKKWAEANPA AAKLFSIMKL SINDVNAQNM RMHSGESSDA DIERHVNGWI NAHQATFDGW VKTAAEAANS QTAQ
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