Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1050 |
Symbol | |
ID | 5387912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1255249 |
End bp | 1256031 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864025 |
Product | hypothetical protein |
Protein accession | YP_001400031 |
Protein GI | 153948010 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.246702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGAAAA GAACATATGC AATGCGGTAT GTTGCAGGAC AACCGGTTGA ACAGATCTTC CCTGGCGCCG CTAAGCAACT CGATAAAGGC TTGCCGTTAG GCGAACCATT ACCTACAGCT GAACTTTTAC GAGTGGTAGT GTGGAATATC TTTAAGCAGC AGCGGGCTGG ATGGCTACCT GTACTTAAGG AACTCGGGCG TGATACTCAA CTGATGTTAC TGCAAGAAGC ACAAACTACA CCTGAGTTGG TGAGGTTTGC GACTGCCAGC TATCAGGCCG CAGATCAGGT ACCTGCTTTT TCATTGCCCC AGCACCCTTC TGGTGTGATG ACGCTGGCTG CGGCTCATCC AGTATATTGT TGCCCTTTGC GTGAGCGTGA GCCGCTACTG CGCTTGTCTA AATCGGCTTT AGTTACTGTC TATCCTATTC ATGATGGTCG CTTGTTAATG GTGGTGAATA TTCATGCGGT AAACTTCAGT CTTGGTGTCG ATGTTTACAG CAAACAGCTC GATCCGATTG GTGATCAAAT TGCTTCACAT CGTGGCCCAG TTATTCTTGC GGGTGATTTT AATGCCTGGA GCCGCCAACG TATTAATGCC TTGCAGCACT TTGCACAGGA CGCTGGTTTA CAAGAGGTTG AATTTCGCGT CGATCACCGC AGTCGTGCGT TCGGCCGGCC TCTGGACTTT ATTTTTTATC GCGGCCTTAC CGTTATTGAT GCTTCAGTTT TAGTGACCAG AGCCTCCGAT CACAACCCAC TCATTGTCGA ATTCCAACCA TAA
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Protein sequence | MPKRTYAMRY VAGQPVEQIF PGAAKQLDKG LPLGEPLPTA ELLRVVVWNI FKQQRAGWLP VLKELGRDTQ LMLLQEAQTT PELVRFATAS YQAADQVPAF SLPQHPSGVM TLAAAHPVYC CPLREREPLL RLSKSALVTV YPIHDGRLLM VVNIHAVNFS LGVDVYSKQL DPIGDQIASH RGPVILAGDF NAWSRQRINA LQHFAQDAGL QEVEFRVDHR SRAFGRPLDF IFYRGLTVID ASVLVTRASD HNPLIVEFQP
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