Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1048 |
Symbol | dkgB |
ID | 5385657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1253586 |
End bp | 1254389 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640864023 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | YP_001400029 |
Protein GI | 153949639 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00311623 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATAC CTGTATTCGG ATTAGGAACT TTTCGCCTTC AAGATCAAAT TGTTATTGAT TCAGTGAGCC AAGCTCTGAC GTTGGGCTAT CGGGCGATTG ATACAGCACA AATATATGAA AATGAAGCGG CTGTTGGTCA GGCAATCCAA GAAAGTGGTA TTAATCGTGA TGAACTATTT ATTACTACTA AGATCTGGAT TGCTAATTTA TCAAAAGACA AATTAATTCC CAGCCTGCGA GAAAGCATAC AGAAACTGAA AACTGACTAT GTAGATTTAA CACTGATTCA TTGGCCATCA CCTAATGATG AAGTTTCTGT TGCTGAATTT ATGTCCGAGT TATTAAAAGC AAAAGGGCTA GGCTTAACTC GTCAAATTGG TATTTCTAAC TTTACTATTG ATTTAATGAA GCAGGCGATT GCTGCCGTTG GTGCAGAAGA GATTGCAACT AATCAAATCG AGCTTTCTCC ATTATTACAA AACCGTAATG TTGTTGATTT TGCCAAACAA AATGGCATTG CAGTGACTTC CTATATGACA CTGGCTTATG GCAAGGCACT TGCAGAGCCA GTGATTAAAA CGATTGCTGA GCAACATGGT GCGACCCCCG CACAAGTTAT TTTGAGTTGG GCGATGCAAT TGGGTTATGG CGTTATTCCG TCATCGACTA AAGCTGCTAA CTTGGCCAGC AACTTACTAG CACAGAAATT ATGCCTGAAT GCAGCAGATA TGGCGTTGAT CGCCACATTG GATCGCAATG AGAGGTTGGT CAGCCCTGAT GGTTTAGCAC CTAAATGGGA TTAA
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Protein sequence | MSIPVFGLGT FRLQDQIVID SVSQALTLGY RAIDTAQIYE NEAAVGQAIQ ESGINRDELF ITTKIWIANL SKDKLIPSLR ESIQKLKTDY VDLTLIHWPS PNDEVSVAEF MSELLKAKGL GLTRQIGISN FTIDLMKQAI AAVGAEEIAT NQIELSPLLQ NRNVVDFAKQ NGIAVTSYMT LAYGKALAEP VIKTIAEQHG ATPAQVILSW AMQLGYGVIP SSTKAANLAS NLLAQKLCLN AADMALIATL DRNERLVSPD GLAPKWD
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