Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1022 |
Symbol | skp |
ID | 5385610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1226245 |
End bp | 1226742 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640863995 |
Product | periplasmic chaperone |
Protein accession | YP_001400006 |
Protein GI | 153950599 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0216507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAGT GGTTGTGTGC CGCAAGTCTA GGTTTAGCAT TGGCTGCTTC AGCCAGCGTT CAAGCAGCTG ACAAAATTGC TATTGTTAAT GTTTCCAGCA TTTTCCAACA ATTACCCGCG CGTGAAGCCG TGGCTAAGCA GCTGGAGAAT GAATTCAAAG GCCGTGCAAC CGAACTGCAA GGAATGGAGC GCGATCTGCA GACTAAAATG CAGAAGCTAC AACGTGATGG TTCTACCATG AAAGCCAGTG ATCGTACCAA GCTGGAAAAT GAAGTAATGA AACAGCGTGA AACTTTCTCT ACTAAAGCGC AGGCTTTTGA GCAAGATAAC CGCCGTCGTC AGGCAGAAGA GCGTAACAAA ATCCTGAGCC GTATTCAGGA TGCTGTTAAA TCTGTTGCTA CCAAAGGTGG CTATGACGTA GTCATTGATG CGAATGCAGT GGCATACGCT GATTCTTCTA AAGACATTAC TGCTGACGTA CTGAAACAGG TTAAATAA
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Protein sequence | MKKWLCAASL GLALAASASV QAADKIAIVN VSSIFQQLPA REAVAKQLEN EFKGRATELQ GMERDLQTKM QKLQRDGSTM KASDRTKLEN EVMKQRETFS TKAQAFEQDN RRRQAEERNK ILSRIQDAVK SVATKGGYDV VIDANAVAYA DSSKDITADV LKQVK
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