Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1021 |
Symbol | |
ID | 5387678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1223700 |
End bp | 1226087 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863994 |
Product | outer membrane protein assembly factor YaeT |
Protein accession | YP_001400005 |
Protein GI | 153949885 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000998639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATGA AAAAGTTGCT CATAGCGTCG CTGCTGTTTG GCAGCGCCAC CGTATACGGT GCAGACGGGT TCGTAGTGAA CGATATTCAT TTCGAAGGAC TGCAACGGGT CGCCGTCGGT GCGGCGTTAC TTAATATGCC GGTTCGCGTA GGCGATACCG TCAGTGATGA TGACATCGGT AAAACTATCC GTGCGTTGTT TGCTACAGGC AACTTCGAGG ACGTTCGCGT CCTGCGCGAT GGTAATACGC TGATTGTTCA AGTCAAAGAA CGCCCCACGA TTGCCAGCAT CACTTTCTCC GGTAATAAAG CGGTGAAAGA AGATATGCTC AAGCAGAATC TGGAAGCCTC TGGCGTCCGG GTTGGCGAGG CCTTGGACCG AACCACTATA TCCAACATTG AAAAAGGACT CGAAGATTTC TATTACAGTG TGGGTAAATA CAGCGCTTCA GTGAAGGCTG TTGTTACGCC ATTACCACGT AATCGTGTTG ACCTGAAATT GGTCTTTACC GAAGGTGTTT CTGCAAAAAT TCAGCAGATT AATATCGTAG GTAATCACAG TTTCACCACT GATGAGCTTA TCTCACGCTT CCAACTGCGT GACGAGGTGC CTTGGTGGAA CGTAGTCGGT GATCGTAAAT ATCAGAAACA GAAACTGGCA GGTGACCTTG AAACCTTGCG CAGCTTCTAT TTAGACCGCG GTTATGCGCG CTTTAATATC GATTCAACTC AGGTGAGTTT GACGCCAGAT AAAAAAGGCA TCTATGTCAC CATCAATATT ACTGAAGGCC CACAATTCAA GCTAAATAGT GTGATTGTGA GCGGCAATCT TGCAGGGCAT CAATCTGAAG CTGAGAAGCT GACAAAAATT GAGCCGGGTG AGTTGTTTAA CGGCAGTAAA GTGACACGTA TGGAAGATGA CATCAAAAAG ATGTTGGGCC GTTACGGCTA TGCTTACCCA CGTGTTGTCA CTCAGCCAGA AATTAATGAT GACGATAAAA CAGTTAAACT GCATATCAAC GTGGATGCAG GTAACCGTTT CTATGTCCGC CATATTCGTT TCGAAGGTAA CGATACCAGT AAAGACTCGG TGTTGCGCCG TGAAATGCGC CAGATGGAAG GTGCATGGTT GGGCAATGAT CAGGTAGAAG CGGGTAAAGA GCGACTTAAC CGTTTGGGTT ACTTCGAGAC CGTTGATGTT GAGACTCAAC GTGTACCGGG AGCTGCCGAT CTGGTTGATG TGACCTATAA AGTGAAAGAA CGAAACACGG GCAGCCTGAA CTTTGGTATT GGTTATGGTA CCGAGAGCGG GGTGAGTTTC CAGGTTGGCG TTCAGCAAGA TAACTGGCTA GGCACCGGTA ATACCGTGGG TATTAACGGC ACAAAGAACG ATTATCAGAC GTATGCAGAA TTTACGCTAA TGGACCCTTA CTTCACTGTT GATGGTGTAA GTCTGGGTGG GCGTATTTTC TACAATGACT TTAAAGCGGA TAATGCAGAT TTATCTGGCT ATACCAACAG TAGCTATGGT GCCGACGGTA CTCTTGGCTT CCCAATTAAT GAGAATAACT CATTACGTGT TGGTGTCGGT TATGTCCATA ACGATCTGTC TGACATGTTA CCGCAAGTTG CGATGTGGCG TTATCTTGAA TCAGTGGGTG AGCGCCCGGG CTATGATGGA CGTGAAGGTT TCACTACTGA TGACTTCACT CTGAATCTAG GGTGGACATA TAACAACCTT GACCGTGGTT TCTTCCCAAC ATCGGGGGTG AAATCATCGG TGAACACGAA AATTACCGTG CCAGGCTCAG ATAATGAGTT CTACAAAGTG ACTTTCGATA CATCAGCTTA CCAGCCATTA AATGAAGATC GTTCGTGGGT GCTCTTAGGC CGTGGTCGCT TAGGTTATGG TGACGGTATT GGTTCGAAAG AGATGCCATT CTACGAAAAC TTCTATGCAG GTGGTTCCAG CACGGTTCGT GGTTTCCGGT CGAATAACAT TGGTCCAAAA GCGGCGTATT ACGCTAATGG TGGGGCTACA GTGACTAACT CTACCGATGC GGTAGGGGGT AATGCGATGG CGGTGGCCAG TATCGAGTTG ATCACACCGA CACCGTTTAT CAGCGAGAAA TACTCGAATT CAGTGCGTAC CTCCATCTTT ATCGACTCAG GTACTGTGTG GGATACCAAT TGGGAAAACA CAGCTAAAAC GCGTGCTGCA GGTATTCCTG ATTACGGTAA AGCGAGTAAT ATTCGTGTGT CTGCGGGTGT AGCATTGCAA TGGATGTCTC CATTGGGTCC ATTGGTGTTC TCATATGCTA AACCAGTTAA AGATTACGAA GGTGATAAGT CAGAGCAATT CCAGTTTAAC ATTGGTAAAA CTTGGTAA
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Protein sequence | MAMKKLLIAS LLFGSATVYG ADGFVVNDIH FEGLQRVAVG AALLNMPVRV GDTVSDDDIG KTIRALFATG NFEDVRVLRD GNTLIVQVKE RPTIASITFS GNKAVKEDML KQNLEASGVR VGEALDRTTI SNIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFT EGVSAKIQQI NIVGNHSFTT DELISRFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSFY LDRGYARFNI DSTQVSLTPD KKGIYVTINI TEGPQFKLNS VIVSGNLAGH QSEAEKLTKI EPGELFNGSK VTRMEDDIKK MLGRYGYAYP RVVTQPEIND DDKTVKLHIN VDAGNRFYVR HIRFEGNDTS KDSVLRREMR QMEGAWLGND QVEAGKERLN RLGYFETVDV ETQRVPGAAD LVDVTYKVKE RNTGSLNFGI GYGTESGVSF QVGVQQDNWL GTGNTVGING TKNDYQTYAE FTLMDPYFTV DGVSLGGRIF YNDFKADNAD LSGYTNSSYG ADGTLGFPIN ENNSLRVGVG YVHNDLSDML PQVAMWRYLE SVGERPGYDG REGFTTDDFT LNLGWTYNNL DRGFFPTSGV KSSVNTKITV PGSDNEFYKV TFDTSAYQPL NEDRSWVLLG RGRLGYGDGI GSKEMPFYEN FYAGGSSTVR GFRSNNIGPK AAYYANGGAT VTNSTDAVGG NAMAVASIEL ITPTPFISEK YSNSVRTSIF IDSGTVWDTN WENTAKTRAA GIPDYGKASN IRVSAGVALQ WMSPLGPLVF SYAKPVKDYE GDKSEQFQFN IGKTW
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