| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1010 |
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| Symbol | dapD |
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| ID | 5385340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1210727 |
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| End bp | 1211551 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863982 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001399994 |
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| Protein GI | 153947374 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.172392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCAAC TACAAAACGT TATTGAAACC GCCTTCGAGC GCCGTGCTGA CATTACGCCA
GCGAACGTAG ACACCGTAAC GCGCGAAGCG ATTACCCATG TGATCGATTT ACTGGACACC
GGCGCGCTGC GCGTCGCAGA AAAAATTGAT GGTCAGTGGG TGACGCATCA GTGGCTGAAA
AAAGCGGTAC TGCTTTCTTT CCGCATCAAT GACAATCAAG TAATGGAAGG CGCTGAAACC
CGTTACTATG ACAAAGTACC CATGAAATTC GCAGGCTATG ATGAAGCGCG TTTCCAACGT
GAAGGTTTCC GCGTTGTTCC ACCAGCAACC GTGCGTAAAG GCGCATTTAT TGCCCGCAAT
ACGGTGTTGA TGCCTTCCTA TGTCAATATT GGTGCTTTTG TTGATGAGGG CACTATGGTC
GATACTTGGG CCACCGTGGG TTCTTGCGCG CAAATCGGTA AAAACGTCCA TCTATCTGGT
GGCGTTGGTA TTGGCGGCGT CTTGGAGCCA CTGCAAGCGA ACCCAACCAT TATCGAAGAT
AACTGCTTCG TAGGCGCACG CTCAGAAGTG GTTGAAGGCG TTATCGTCGA AGAAGGTTCT
GTTATCTCCA TGGGCGTGTT TATCGGTCAA AGCACCCGTA TTTATGATCG TGAAACTGGC
GAAGTCCATT ATGGCCGAGT GCCAGCAGGT TCGGTTGTCG TCTCTGGCAA CTTGCCATCG
AAAGATGGCA GCTATAGCTT GTACTGCGCA GTTATCGTGA AAAAAGTTGA CGCGAAAACT
CGCAGTAAAG TCGGTATTAA TGAGTTATTA CGCACCATCG ACTAA
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| Protein sequence | MQQLQNVIET AFERRADITP ANVDTVTREA ITHVIDLLDT GALRVAEKID GQWVTHQWLK
KAVLLSFRIN DNQVMEGAET RYYDKVPMKF AGYDEARFQR EGFRVVPPAT VRKGAFIARN
TVLMPSYVNI GAFVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFVGARSEV VEGVIVEEGS VISMGVFIGQ STRIYDRETG EVHYGRVPAG SVVVSGNLPS
KDGSYSLYCA VIVKKVDAKT RSKVGINELL RTID
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