Gene YpsIP31758_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1001 
Symbol 
ID5387602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1202417 
End bp1203523 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content46% 
IMG OID640863972 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_001399985 
Protein GI153949986 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00000913251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA AAATTGCTTT ATATTGCCGC TCCGGCTTTG AGAAAGAGTG TGCGGCAGAA 
ATAACAGAGA AGGCTGCACA GCTCGAAATC TTTGGTTTTG CACGGGTAAA AGAAAACAGT 
GGCTATGTAT TGTTTGAATG CTACCAGTTA GAGGATGCGG ATCGACTCAT CCGTGAAATA 
CCGTTCCGCG AGTTTATTTT CGCCCGCCAA ATGATGGTGG TGGGGGAGTT ATTGAAAGAC 
TTACCCCCAG AAGACCGTGT GTCACCGATC GTGGGAATGT TGGTTGGCGT TATTGAAAAA 
GCTGGCGAGT TACGTGTTGA GGTGGCCGAC ACCAATGAAA GCAAAGAGTT ACTCAAATTT 
TGCCGTAAGC TGACGGTACC TTTGCGTAGT GCTTTGCGTG AACAGAAAAT TCTGTCCGCT 
CGTGAGAATG CACATCGGCC AGTGGTGCAT GTGTTCTTTA TTGCGCCGGG TTGTTGTTAT 
GTTGGTTATT CTTACAGCAA TAATAACTCT CCATTCTATA TGGGGATCCC TCGACTTAAA 
TTCCCCTCCG ATGCACCAAG TCGCTCAACC TTAAAACTGG AAGAGGCATT CCATGTATTT 
ATCCCCGCGG ATGAATGGGA GGAGCGTTTA GCCAGTGGTA TGCATGCTGT CGATTTAGGC 
GCTTGTCCCG GTGGCTGGAC TTATCAATTA GTTCAACGCA GCATGATGAT ACAAGCGGTT 
GATAATGGTT TGATGGCACA AAGCCTGATG GATACGGGGC AGGTCACACA TCACCGTGCT 
GATGGTTTTA AGTATGAGCC TACCCGCAGC AATATTTATT GGTTAGTGTG TGACATGGTG 
GAAAAACCAA CAAAGGTCAC GCAGCTTATC ACCAAATGGC TAGTCAATGG TTGGTGCCGT 
GAAGCGATCT TCAACCTGAA ATTACCAATG AAAAAGCGTT ATGAAGAAGT TGTACAAAAT 
TTAGCAATGA TGGATGAGCA GTTGAAAGAA AACGGTATTA ATGCTGATAT CCATGCCAAA 
CAGCTCTACC ATGATCGCGA AGAAGTTACG GTGCATGTCC GTCGTATCTG GTCGGGTGCA 
CCGGGCCGCC GTGATGAGCG TTATTAG
 
Protein sequence
MNNKIALYCR SGFEKECAAE ITEKAAQLEI FGFARVKENS GYVLFECYQL EDADRLIREI 
PFREFIFARQ MMVVGELLKD LPPEDRVSPI VGMLVGVIEK AGELRVEVAD TNESKELLKF 
CRKLTVPLRS ALREQKILSA RENAHRPVVH VFFIAPGCCY VGYSYSNNNS PFYMGIPRLK 
FPSDAPSRST LKLEEAFHVF IPADEWEERL ASGMHAVDLG ACPGGWTYQL VQRSMMIQAV 
DNGLMAQSLM DTGQVTHHRA DGFKYEPTRS NIYWLVCDMV EKPTKVTQLI TKWLVNGWCR 
EAIFNLKLPM KKRYEEVVQN LAMMDEQLKE NGINADIHAK QLYHDREEVT VHVRRIWSGA 
PGRRDERY