| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0999 |
|---|
| Symbol | gcvA |
|---|
| ID | 5384755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1200946 |
|---|
| End bp | 1201863 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640863970 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_001399983 |
|---|
| Protein GI | 153947641 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000272283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC GATTACCACC CCTGAATGCC TTACGGGCTT TTGATGCCGC CGCCCGTCAC
CTCAGTTTCA CTAAAGCAGC CGAGGAGTTA TTTGTCACTC AAGCCGCTGT TAGCCACCAG
ATCAAATCGC TGGAGGATTT TCTCGGGCTG AAATTGTTCC GCCGACGTAA TCGCTCTTTG
TTGTTGACCG AAGAAGGGCA GAGCTATTAC CTCGATATCA AAGAGATTTT CACGTCTATT
AATGAAGCGA CTCGTAAGTT GCAAGCGCGC AGTGCGAAGG GAGCGTTAAC CGTCAGTTTG
CCGCCCAGTT TTGCCATTCA ATGGCTGGTT CCTCGTTTGT CTGGGTTTAA TGCGGCTTAT
CCAGGCATTG ATGTGAGGAT CCAAGCGGTG GATCGGGAAG AGGATAAGCT CGCTGATGAT
GTGGATGTCG CGATATTCTA CGGCCGCGGT AATTGGAGTG GGTTGCGTAC AGAGCGCTTG
TATGCTGAAT TCCTATTACC CGTCTGTGCA CCTAGCTTAC TAACTGGTGA GAATGGATTA
AAAGTACCAT CAGATCTGGC TAATCACACC TTGTTGCATG ATACTTCACG CCGTGACTGG
TTAGCGTATA CCCGCCAACT GGGGGTACCG CAGATTAATG TGCAGCAAGG CCCGATATTT
AGCCACAGTG CCATGGTGGT TCAGGCTGCG GTTCATGGTC AAGGGATTGC TCTGGTGAAT
AATGTCATGG CCCAGTCTGA GATTGAAGCG GGCCGATTGG TTTGCCCGTT TAACGATGTA
TTGGTGAGTA AGAATGCTTT TTATTTGGTT TGTCATGACA GTCAGGCAGA ACTGGGTAAA
ATAGCCGCCT TCCGTCAGTG GATACTGGCA AGAGCTGCCA GCGAGCAGGA GAAATTACGT
TTTCGTTATG AAAACTGA
|
|---|
| Protein sequence | MSKRLPPLNA LRAFDAAARH LSFTKAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL
LLTEEGQSYY LDIKEIFTSI NEATRKLQAR SAKGALTVSL PPSFAIQWLV PRLSGFNAAY
PGIDVRIQAV DREEDKLADD VDVAIFYGRG NWSGLRTERL YAEFLLPVCA PSLLTGENGL
KVPSDLANHT LLHDTSRRDW LAYTRQLGVP QINVQQGPIF SHSAMVVQAA VHGQGIALVN
NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA RAASEQEKLR
FRYEN
|
|---|
| |