Gene YpsIP31758_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0994 
Symbol 
ID5388405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1194123 
End bp1195373 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content47% 
IMG OID640863961 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001399978 
Protein GI153949599 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.367182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATT CAAATCATAA TTCTGGTCGT CGCCGTCTAT TACAAGGTGC CGCAGCAGCT 
TGGATGCTGA GTATAAGCCG GGTTGGATTT GCCGCATCTT CACATATTGT TGCTGTCCGG
GTGTGGCCCT CTTCTACTTA CACCCGAGTC ACATTAGAGT CAAATACACC ACTGAAGTAC
CGCCAATTCG CCTTAACTCA TCCCGACCGT ATTGTTGTTG ATATTGAAGG CGTACAGCTA
AATAGCGTAT TGAAAGAGAT CAGCCGGCAA GTTCAATCCG CTGACCCTTA TCTCAAACAG
GCGCGGGTAG GGCAGTTCGA TAAAAATACT GTTCGTTTGG TATTGGAACT GAAGCAGAGT
ATCAGCCCTC AATTATTTAC CCTGAAACCT TTCGCTGAAT TCCGTAATCG CTTAGTGGTC
GATCTGTACC CTGCGGAGGG GGGCACATCG GCAGAAGATG ATCCGCTGCT GGCCCTATTG
GAAGATTACA ATAAAGGTAA TGTGGATCGA ACCTTGCCAC CAGAAACACC CAAAGCAGGT
AAAGCAGGGC GTGACAGACC CATTATTATC ATGTTGGACC CTGGACATGG CGGGGAAGAT
CCTGGGGCTA TCGGCAAAAA TAAAACCAAG GAAAAAGACA TTGTGCTGCA AATTGCTCGT
CGGTTACGGG CGCTTATTCA GAAAGAAGCC AATATGCGGG TGTTTATGAC TCGTAATGAA
GATGTCTTTA TCCCGCTGAA AGTTCGGGTG GCAAAAGCAC GTAAGCTTCG TGCGGATTTA
TTCATTTCGA TTCATGCCGA TGCTTTTACC AATCGGGCGG CTAGCGGCTC CTCGGTCTTT
GCTTTATCGA CCAAAGGAGC CACCAGTACT GCCGCTCGTT TTCTGGCTCA GACACAAAAT
GAGGCCGATC AGATTGGTGG GGTCAGCAAA AGTGGTGATC CTTATCTTGA CCATACCATT
ATTGATTTAT TGCAAACCGC AACTATCAAC GATAGCTTGA AGTTTGGTAA AGAAGTACTG
AGTCGGATGA GTAAAATCAA CAAATTGCAC AAAAATCGTG TCGATCAAGC AGGATTTGCG
GTACTAAAAG CACCTGATAT CCCGTCAATT CTGGTAGAAA CTGCGTTCAT CAGTAATTTG
GAAGAAGAGC GGAAATTACG TACCAGCCGT TTTCAGCAAC AGATAGCGGA ATCTATTTTT
GCTGGTATCA AAGCGTACTT TGCTAATGGC GGGGCAATGG CGCGATTGTG A
 
Protein sequence
MADSNHNSGR RRLLQGAAAA WMLSISRVGF AASSHIVAVR VWPSSTYTRV TLESNTPLKY 
RQFALTHPDR IVVDIEGVQL NSVLKEISRQ VQSADPYLKQ ARVGQFDKNT VRLVLELKQS
ISPQLFTLKP FAEFRNRLVV DLYPAEGGTS AEDDPLLALL EDYNKGNVDR TLPPETPKAG
KAGRDRPIII MLDPGHGGED PGAIGKNKTK EKDIVLQIAR RLRALIQKEA NMRVFMTRNE
DVFIPLKVRV AKARKLRADL FISIHADAFT NRAASGSSVF ALSTKGATST AARFLAQTQN
EADQIGGVSK SGDPYLDHTI IDLLQTATIN DSLKFGKEVL SRMSKINKLH KNRVDQAGFA
VLKAPDIPSI LVETAFISNL EEERKLRTSR FQQQIAESIF AGIKAYFANG GAMARL