| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0991 |
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| Symbol | recB |
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| ID | 5386297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1186775 |
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| End bp | 1190437 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640863958 |
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| Product | exonuclease V subunit beta |
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| Protein accession | YP_001399975 |
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| Protein GI | 153950402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCA CGACTCCCCA GCGGCTTGAG CCGCTGGCGC TTCCCCTCTA TGGCGAGAGG
CTGATAGAAG CCTCTGCCGG TACTGGTAAG ACATTTACCA TCGGGGTCCT TTATCTTAGA
TTGTTGCTTG GGTTAGGGGG CGATGCTGCA TTCCGTCGCC CTTTGATGGT GGAGGAAATC
CTAGTGGTGA CCTTTACTGA AGCCGCGACC GAAGAGCTCA GGGGGCGAAT TCGCGATAAT
ATTCATGGGT TGCGTATCGC TTGCGTTCGG GGAGTCAGTG ATGACCCAAT GTACCAGGCT
CTATTAGCCG AAATCACCGA TTGGGCCGTA GCCGCCGCGC AATTATTGGC GGCTGAGCGT
CAGATGGATG AAGCCGCGAT TTACACTATT CATGGTTTCT GCCAAAGAAT GCTGGCAAAT
AACGCTTTTG AATCCGGCAT TTTATTCGAA CAAACGTTAG TTCAGGATGA ACTCCCGTTA
TGGCGGCAGG CCTGTGCTGA CTTCTGGCGG CGTCATTGTT ATCCGCTTCC CTTAGTCATC
GCACGGGCGG TCAGTCAGGA GTGGAGCGGG CCGGAGGCAT TACTCAGTGA TCTGAGTGCT
TATTTACAAG GTGAAACGCC AAAGTTTCGG CAAGCGCCCG GTGACGATGA AACGATCCTT
AGCCGCCATC AGCACGTTGT GACACAGATT GATGCACTTA AAGCAGAGTG GCGCTTAGCC
GCCCCTGAAT TAGAAGCATT AATTAGTCGT TCTGGCGTTG ATAAACGCAG TTATAGCAGC
AAGCACTTAC CCAACTGGCT GGAAAAAGTA GGATTATGGG CGGAGCAGGA AACGGAAGAT
TATCAATTAC CCAAAGAACT GGAAAAATTT CGCCAGTCGG TATTATTGGA AAAGACCAAG
AAGGGAGCCG CCCCACAACA TACTTTATTT AGTGCGATAG ACTCGATATT TGAACAGCCC
CTAACGTTGA GGGATCTTAT TTTAGCTCGA GCCATCAGCG AAATACGGTT TTCTGTACAG
CAGGAAAAAC GGCAGCGTGC AGAGCTGGGG TTTGATGATT TACTCAGTAA GTTAGATGCC
GCATTACAAC AATCGGGGGG GGAGTTGCTC GCTCAATCTA TTCGTACCCG TTACCCCGTT
GCAATGATCG ATGAGTTTCA GGATACCGAC CCGCAACAAT ATCGCATTTT CCACACCGTT
TATGGCGGGC AAGAAGCGTG CGCTTTACTG TTGATCGGTG ATCCTAAACA GGCTATTTAT
GCTTTTCGTG GCGCAGATAT ATTTACCTAT ATTCGCGCCC GTTCAGAAGT AAGCGCCCAC
TACACATTGG AAACCAACTG GCGCTCTTCT TTTCCCATGG TGCAATCAGT GAACAGGCTA
TTTAGTCTGG TTAATACGCC TTTCTTATTT GAGCAAATCC CCTTTATTAA TGTCGCCGCC
GCCAAAAAGA ATCATGATTT ATCCTTTGAA ATTAAAGGAG AAAAGCAACC TGCGCTACAT
TTTTGGCTGC AACCCGGTGA CGGTGTTGGT GTAAGTGAGT ACCAACAAGT AATGGCTAGA
CAATGTGCAG CGCAAATTCG TGATTGGTTG ACTGCCGGCC AGCAGGGGCA AGCAGAACTA
CTGACCACGA AAGGACCAAA ACCGGTTCAG GCATCAGATA TAACCATACT GGTGCGTAGC
CGGGCAGAGG CCGCATTGAT ACGTGATGCA CTTAGTGCGC TGGCGATCCC ATCGGTCTAT
TTATCTAATC GTGACAGTGT CTTTGAGACT ACAGAAGCCA AAGATCTCTT GTGGTTACTG
CAAGCCGTGT TAGCACCAGA GCAGGAGCGC GCACTACGTA GTGCTATGGC TACGGGGATC
TTGGGGTTGG ATGCCAGAAT GTTGGATGCG TTAAATCACG ATGAGCGAGC TTGGGATGCG
CTGGTCGATG AGTTTGATCA CTATCGCCAG CATTGGCAGC GCCGTGGGGT ATTACCCATG
CTGCGGGAGA TGATGGCCCG CCGCCATTTA GCTGAAAACT TGTTGGCAAC ACCCGGTGGG
GAGCGTCGGC TGACAGATTT ACTACATCTT GGGGAATTAC TGCAAGAGGC CGCCTCGCAA
CTGGATAGTG AGCACGCACT AATTCGCTGG TTGGCCCAGC AAATTGCTCA ACCCAATCCC
CAGTCAGATA GCCAACAATT ACGCTTGGAA AGTGATCGCC ATTTGGTTCG AGTGGTTACT
ATCCATAAAT CGAAAGGGTT GGAATATCCA TTAGTTTGGC TGCCTTTTAT CGGTAATTTT
CGGCAACAAC AGAATGTGCT TTACCATGAC CGACATAGCT TTGAGGCTTT ACTCGATCTT
AATGCTGATG AAGAAAGCCA GGCTTTAGCT GAAGAAGAAC GTCTGGCTGA GGATTTACGG
CTATTGTATG TCGCGTTGAC GCGTTCGGTT TATCATTGCA GCGTGGGCAT TGCACCGCTG
ATTAAAGGGG GGAGGAAAAA GCAAGGCGAG AGTGATATGC ATCGCAGTGC GTTAGGTTAT
TTGGTTCAGC ATGGTCAACC CGGTGATGCT CATGTTCTAA GCGAAAAGTT AACTGAGTTA
GCGCGCTCAT CGAATGGTGA TATTTGCGTT TCGCCCGTTG AGCCTCCTGA TGATAAACCT
TGGCAACCAC AGCCCGAAGC CTTGCCTGAA CTTACCGCCC GCCATTTTAC TCGAAAAATG
CAAGATTATT GGCGCGTAAC CAGCTATTCA GGTTTACAGC AGTCTGGCTC TACAAAGAAG
CTGTATGGTT CTGCAACAGG GGACGTATCG CAGGCTCTGG GGGCACCATT ACAGGTCTTG
TTGCCACGGT TGGACATTGA TGCCGTAGGT GAGCAGGCGG TGGTGACAGA AGACGATCAT
TTAACACCTC ATACCTTCCC TCGGGGAGCG GCCCCAGGGA CTTTCTTACA TGATTTGCTT
GAGCCATTAG ATTTTAGTCA ACCGATTGAA TTGGCGTGGT TGTCTGAGCG GCTACAGCAA
CAGGGTTTTA GCGAACAGTG GGCACCGGTG TTACACCAGT GGCTAAATGA TATAGTGCAA
ACGCCGCTTA CCGATACCGG GGCCACTTTG GCTGGGTTGT CGCCAGAGCG CAAACAGGCC
GAGCTACAAT TTTATCTACC CATCGATAGC CTGCTACGGG CCGAGGTATT AGACCGTTTA
ATCAAACAGT ATGATCCACT TTCCCGGCAG TGCCCTGTAT TGGATTTTCA ACAGGTTAGA
GGGATGCTCA AGGGGTTTAT TGACTTGGTT TTTTGCTGGC AGGGGCAATA TTACTTGCTG
GATTACAAAT CCAATTGGTT GGGTGAGGAC AGTCGTGCTT ATACCGTTGA GGCGATGACA
CAAGCGATGG CTGAACATCG CTATGATCTG CAATACCAAC TTTATACTTT GGCTTTACAC
CGCTATTTAC GCCATCGTTT GGCAGATTAT GACTATCAAC GCCACTTTGG TGGGGTTATT
TACCTCTTCT TGCGCGGCGT TGATCAGCAA CATTCAGGGC ACGGTATTTT TAATTGCCGG
CCTGAACAGA AACTGATTGA AGAAATGGAT CGCTTATTCA GTGGCACAAT TGGCAGTAAC
GCAACCGCGA GTGACAAAAA CGGTAGCAAT GTCATTCACA GCGGCGAGAG GGCATCACGA
TGA
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| Protein sequence | MTPTTPQRLE PLALPLYGER LIEASAGTGK TFTIGVLYLR LLLGLGGDAA FRRPLMVEEI
LVVTFTEAAT EELRGRIRDN IHGLRIACVR GVSDDPMYQA LLAEITDWAV AAAQLLAAER
QMDEAAIYTI HGFCQRMLAN NAFESGILFE QTLVQDELPL WRQACADFWR RHCYPLPLVI
ARAVSQEWSG PEALLSDLSA YLQGETPKFR QAPGDDETIL SRHQHVVTQI DALKAEWRLA
APELEALISR SGVDKRSYSS KHLPNWLEKV GLWAEQETED YQLPKELEKF RQSVLLEKTK
KGAAPQHTLF SAIDSIFEQP LTLRDLILAR AISEIRFSVQ QEKRQRAELG FDDLLSKLDA
ALQQSGGELL AQSIRTRYPV AMIDEFQDTD PQQYRIFHTV YGGQEACALL LIGDPKQAIY
AFRGADIFTY IRARSEVSAH YTLETNWRSS FPMVQSVNRL FSLVNTPFLF EQIPFINVAA
AKKNHDLSFE IKGEKQPALH FWLQPGDGVG VSEYQQVMAR QCAAQIRDWL TAGQQGQAEL
LTTKGPKPVQ ASDITILVRS RAEAALIRDA LSALAIPSVY LSNRDSVFET TEAKDLLWLL
QAVLAPEQER ALRSAMATGI LGLDARMLDA LNHDERAWDA LVDEFDHYRQ HWQRRGVLPM
LREMMARRHL AENLLATPGG ERRLTDLLHL GELLQEAASQ LDSEHALIRW LAQQIAQPNP
QSDSQQLRLE SDRHLVRVVT IHKSKGLEYP LVWLPFIGNF RQQQNVLYHD RHSFEALLDL
NADEESQALA EEERLAEDLR LLYVALTRSV YHCSVGIAPL IKGGRKKQGE SDMHRSALGY
LVQHGQPGDA HVLSEKLTEL ARSSNGDICV SPVEPPDDKP WQPQPEALPE LTARHFTRKM
QDYWRVTSYS GLQQSGSTKK LYGSATGDVS QALGAPLQVL LPRLDIDAVG EQAVVTEDDH
LTPHTFPRGA APGTFLHDLL EPLDFSQPIE LAWLSERLQQ QGFSEQWAPV LHQWLNDIVQ
TPLTDTGATL AGLSPERKQA ELQFYLPIDS LLRAEVLDRL IKQYDPLSRQ CPVLDFQQVR
GMLKGFIDLV FCWQGQYYLL DYKSNWLGED SRAYTVEAMT QAMAEHRYDL QYQLYTLALH
RYLRHRLADY DYQRHFGGVI YLFLRGVDQQ HSGHGIFNCR PEQKLIEEMD RLFSGTIGSN
ATASDKNGSN VIHSGERASR
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