Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0989 |
Symbol | recC |
ID | 5386378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1180437 |
End bp | 1183808 |
Gene Length | 3372 bp |
Protein Length | 1123 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863956 |
Product | exonuclease V subunit gamma |
Protein accession | YP_001399973 |
Protein GI | 153950856 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACGG TTTATCATTC TAATCAACTG GATTTACTCA AAGCGCTCAC CACTGCGCTG ATAGAAAGAG AACCGTTGGA TAATCCTTTC CAGCAAGAAG TGGTGTTAGT ACAAAGCCCC GGCATGGCCC AATGGTTACA AATGCAACTG GCTCAACAGT TCAGTATTGC TGCCAATATA GTGTTTCCTC TACCCGCTAC TTTTATCTGG GATATGTTTA CCCGCGTTCT GCCTGATATT CCTAAAGAAA GTGCATTCAG CAAAGAGGCT ATGACCTGGA AACTTATGTG GCTACTGCCA GATTTATTGG AGAATCCACT ATTTTCTCCC ATGAAGCGCT ATTTAAGTGA TGATGGGGAT CGGCGTAAAA TTCACCAACT CGCGGCACGG GTAGCCGATC TTTTTGACCA ATATCTGGTG TATCGTCCGG AATGGCTGGA AAGTTGGGAA CGTGGGCAAT TGATTGAGGG GCTTGATGAT GCACAGCAAT GGCAAGCATT ACTGTGGGTT GAACTGACCC GCTATACTCG CCAATTGGAA CAACCGGAAT GGCACCGGGC AAACCTCTAT CAGCGTTTTA TCCACCAACT ACTCAAGTCG GACGTTTGCC CGCAAGGGTT ACCGAAACGG GTATTTATAT GTGGTATATC GGCGTTGCCA CCTATCTATT TACAGGCCCT ACAAGCATTA GGTAAACACA TTGATATCCA TTTGATGTTT ACTAACCCCT GCCGTTACTT CTGGGGAGAT ATTCAGGATT ACGCTTTCCT CGCTAAATTA CAAAGCCGTA AACGTCGGCA TTACCGTGAA TCGATTGAAC TAAGTCTGTT TCGCCACCCG CAGCAGGCAG AGCAACTATT TAATACCGAT GGTGAGCAGA ACCTCAGTAA CCCACTCTTG GCCTCATGGG GGCGATTAGG GCGGGATCAC ATGTATTTGC TCTCTCAAAT TGATGAGATT CAAGAGGTTC ATGCTTTTGT CGATATCGAG CCAGATAATC TTTTGCATGG CATTCAACAC GATATGCTGG AGTTGGAAGA TCACGCGGTT ATTGGCACAA CCCCAGAAAC CTTAGCGCGT AGTGATCAAA AACGCCGATT AGATCTGGAT GATCGTTCAC TTAGTTTCCA TGCCTGCCAC AGCCGACAAC GAGAAGTTGA GGTGCTGCAA GATCATTTAC TTGGGCTATT AGCCGCAGAC CCTGAATTGA CCCCGCGCGA CATCATTGTG ATGGTGGCGG ATATCGACAG TTATACACCG TATATTCAAG CTGCGTTTGG TAATGCTCCG TCTGAGCGTT ATCTGCCGTT TGCGATTTCT GATCGCAAAG CCAGTCAGGC TCATCCTGCG TTGCACGCCT TTATTACCCT ACTTGATTTA CCCCAGAGTC GCTTTACGGC TGAACAAGTC TTAGCACTGT TGGAAGTCCC TGCTTTGGCG ACCAAATTTG GTATCACTGA AGATGGTTTA CGGCGCCTGC GACAATGGGT TGGTGAGTCA GGCATCCGTT GGGGATTGGA TGATGATAAT GTGCGGGAGC TATCCTTACC TGCTACGGGT CAACACACCT GGCGTTTTGG TTTGACCCGC ATGCTACTGG GTTATGCGAT GGACAGTACC GCAGGGGATT GGCAAGGTAT TCTGCCTTAC GATGAATCCA GCGGGCTGGC AGCGGAACTC GCCGGGCAGT TGGCCGATAT GCTGATGCAC CTGAGTCAAT GGCGGCAACA ATTAGGTCAG CCCCGAGAAC TTAGTGAATG GTTACCAATA TGTCGTCAAT TATTGGATAC GTTCTTCGAT CAAGACAATG ACACTGAGGC CGCTCTGGTG CTGATTGAAC AACAGTGGCA GAAAGTGATC GGCTACGGTA TTGCAGCTCA ATATCCAGAC GTTGTGCCAC TTAATCTGCT ACGAGACGAA TTGGCGGCAC GTTTAGATAA TGAACGTATT AGCCAACGTT TTCTCGCCGG GCCTATCAAT TTCTGTACCT TAATGCCAAT GCGCTCCATC CCATTTAAAG TGGTTTGTCT ATTGGGCATG AATGATGGGG TATACCCGAG AACATTGCCC CCCCAGGGAT TTGATCTAAT GGCCAAGAAG GTTCGTCGGG GTGACCGTAG CCGCCGCGAC GATGATCGCT ATTTGTTCCT AGAGGCTCTG CTATCTGCTC AGCAACAGCT TTATATCAGC TACATTGGGC GTTCTATTCA AGACAACAGT AAGCGTTATC CTTCCGTGCT GGTAAGCGAG TTAATTGAAT ATGTCGCACA AAGCTATCAT TTACCGGGCG ATGAAAAACT CAGTGCTGAT GACAGTGCAC AACGGGTGAC GCAGCACTTA TTATGTTGGC ATGCCCGTAT GCCATTCTCC GCTGAAAATT TTATTAAAAA TAGCGAATTA CAGAGCTATG CCGCTGAATG GCTGCCTTCT GCCGAGTCGA AGGGGCATGC ACACCCAAAT TTTAACCAAC CGCTACAGGC TGAGCCGCTG GCTGAAATTA CACTGGATGA ATTAGTGCGT TTTTACCGCC ATCCAGTGAG AGCATTTTTC CAACTGCGGC TAGGGGTTAA TTTTGTTATT GAAGAAACAG AATTACCTGA CGAAGAGCCA TTTACTTTGG ATAACCTTAG CCGTTATCAA TTTAATACCC AGCTACTTAA TGCGCTGATA AATGAGGACG ATATTAATAG CGTCTTTGCC AGAGCCAGAG CTGCCGGCGT ACTGCCATAT GGATCTTTTG GTGAACTTTA TTGGGAGAGT CAACAAGATG AGATGGTACC CTTGGCTGAA CAAATCCGCA GTGAACGTAA AGAGAATCAC AGTATTGAAC TCAACATTGA ATTCGCTGAC ATCACGGTTA CGGGATGGAT TCATCAGGTT CAGGACGATG GTTTGGTCCG TTGGCGGCCA TCAATATTAA CCGCCGTCGA TGGCCTTTTA TTGTGGCTTG AACATCTCGT GTACTGTTCG GCGGGTGGTG AGGGAGAAAG CCGGATATAT GGACGAAAAG GGACTGCCTG GCGTTATGCC CCTATGGCGG CTGATGAAGC CCGGCCCTAT TTACAACAAC TCATTAAAGG TTATCAACAA GGTTTATGTG AGCCATTGAT GCTCTTGAGT AAAAGTGGAT GGGCGTGGTT GAGCCAATGC TTTGATCGTG AGTCAGGCCA AATTTTGTGG GACGAAGAGA CGCAAGGTAA AGCACGGATG AAACTTTTAC AGGTTTGGCA AGGTGATCAG AGAGTGACAG GCGAAGGTGA AGACCACTAT ATACAAAGGG TTTGCAGACG AATGGACAAC CAACATTTGG ACATAATTTT ACATGAAACT GAACGTTATT TGTTACCGAT AGCTCGCCAT AATAAGGCGT GA
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Protein sequence | MFTVYHSNQL DLLKALTTAL IEREPLDNPF QQEVVLVQSP GMAQWLQMQL AQQFSIAANI VFPLPATFIW DMFTRVLPDI PKESAFSKEA MTWKLMWLLP DLLENPLFSP MKRYLSDDGD RRKIHQLAAR VADLFDQYLV YRPEWLESWE RGQLIEGLDD AQQWQALLWV ELTRYTRQLE QPEWHRANLY QRFIHQLLKS DVCPQGLPKR VFICGISALP PIYLQALQAL GKHIDIHLMF TNPCRYFWGD IQDYAFLAKL QSRKRRHYRE SIELSLFRHP QQAEQLFNTD GEQNLSNPLL ASWGRLGRDH MYLLSQIDEI QEVHAFVDIE PDNLLHGIQH DMLELEDHAV IGTTPETLAR SDQKRRLDLD DRSLSFHACH SRQREVEVLQ DHLLGLLAAD PELTPRDIIV MVADIDSYTP YIQAAFGNAP SERYLPFAIS DRKASQAHPA LHAFITLLDL PQSRFTAEQV LALLEVPALA TKFGITEDGL RRLRQWVGES GIRWGLDDDN VRELSLPATG QHTWRFGLTR MLLGYAMDST AGDWQGILPY DESSGLAAEL AGQLADMLMH LSQWRQQLGQ PRELSEWLPI CRQLLDTFFD QDNDTEAALV LIEQQWQKVI GYGIAAQYPD VVPLNLLRDE LAARLDNERI SQRFLAGPIN FCTLMPMRSI PFKVVCLLGM NDGVYPRTLP PQGFDLMAKK VRRGDRSRRD DDRYLFLEAL LSAQQQLYIS YIGRSIQDNS KRYPSVLVSE LIEYVAQSYH LPGDEKLSAD DSAQRVTQHL LCWHARMPFS AENFIKNSEL QSYAAEWLPS AESKGHAHPN FNQPLQAEPL AEITLDELVR FYRHPVRAFF QLRLGVNFVI EETELPDEEP FTLDNLSRYQ FNTQLLNALI NEDDINSVFA RARAAGVLPY GSFGELYWES QQDEMVPLAE QIRSERKENH SIELNIEFAD ITVTGWIHQV QDDGLVRWRP SILTAVDGLL LWLEHLVYCS AGGEGESRIY GRKGTAWRYA PMAADEARPY LQQLIKGYQQ GLCEPLMLLS KSGWAWLSQC FDRESGQILW DEETQGKARM KLLQVWQGDQ RVTGEGEDHY IQRVCRRMDN QHLDIILHET ERYLLPIARH NKA
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