Gene YpsIP31758_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0972 
SymbolgalR 
ID5387726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1162042 
End bp1163064 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID640863939 
ProductDNA-binding transcriptional regulator GalR 
Protein accessionYP_001399957 
Protein GI153946993 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACTA TAAAGGATGT TGCCAAGCTG GCGGGTGTTT CCGTCGCAAC GGTATCTCGT 
GTTATCAATC ATTCTCCCAA AGCCAGTGAA GCATCACGCG TGGCGGTGTG CAAGGCGATG
GAACAACTGC AATACCACCC GAATGCCAAC GCCCGAGCAC TGGCGCAACA ATCGACAGAA
ACGGTCGGTA TGATTGTGTC TGATGTCTCG GACCCTTTCT TCGGTGCGAT GGTGAAAGCC
GTCGAACAAG TCGCGTATGC CACCGGTAAT TTCCTGTTAA TTGGCAACGG TTACCATGAT
GCCGAAAAAG AGCGTCAGGC CATCGAACAA CTCATTCGCC ACCGCTGCGC TGCGCTGGTG
GTACATGCCA AAAAATTACC CGATGACGAA CTGACGTCAT TAATGGAACA AATTCCTGGC
ATGGTGTTAA TTAACCGCAC CTTACCGGGC TTCGAACCCC GTTGTATCGC ATTAGATGAC
CGCTATGGTG CCTGGCTGGC AACTCGCCAT CTCATCCAGC AGGGGCATAA ACGGGTCGCG
TTCATTTGCT CCAATCATCA GATTTCCGAT GCGCTTGACC GGATGCAAGG CTATTTGGAT
GCGTTGAAAG AATTTGATAT CCCGGTTGAT GAGCGTTTAA TTACCTACGG CACCCCCGAC
GAACTCGGCG GTGAGCAGGC AATGACCGAT CTACTTGGCC GTGGTAAACA CTTCACCGCG
GTAAGCTGTT ATAACGACTC AATGGCGGCC GGGGCGTTAT CGGTTCTCAG TGATAACAGT
ATTGATGTGC CACAGGAGAT TTCACTCATC GGTTTTGATG ATGTATTAAT CTCCCGTTAC
CTGCGCCCAC GCCTGACGAC AATCCGTTAC CCAGTCGTTG CCATGTCTAC CCAGGCCGCT
GAGTTGGCAC TCGCATTAGC CAACAACACA CCGTTACCCG AAATTACCAA TATGTTCAGC
CCAACACTGG TTCGCCGCCA CTCTGTGGCC AGCCCGCCAA GCCTACGGGA TGACACTGAT
TAA
 
Protein sequence
MATIKDVAKL AGVSVATVSR VINHSPKASE ASRVAVCKAM EQLQYHPNAN ARALAQQSTE 
TVGMIVSDVS DPFFGAMVKA VEQVAYATGN FLLIGNGYHD AEKERQAIEQ LIRHRCAALV
VHAKKLPDDE LTSLMEQIPG MVLINRTLPG FEPRCIALDD RYGAWLATRH LIQQGHKRVA
FICSNHQISD ALDRMQGYLD ALKEFDIPVD ERLITYGTPD ELGGEQAMTD LLGRGKHFTA
VSCYNDSMAA GALSVLSDNS IDVPQEISLI GFDDVLISRY LRPRLTTIRY PVVAMSTQAA
ELALALANNT PLPEITNMFS PTLVRRHSVA SPPSLRDDTD