| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0970 |
|---|
| Symbol | lysR |
|---|
| ID | 5385538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1159627 |
|---|
| End bp | 1160568 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863937 |
|---|
| Product | DNA-binding transcriptional regulator LysR |
|---|
| Protein accession | YP_001399955 |
|---|
| Protein GI | 153950329 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAA TTTCCTTACG ACAAATCGAG ATTTTTCATG GCGTCATGAC CACGGGCAAC
CTGACTGAAG CGGCGTTGTT ACTGCAAACA TCACAACCGA CTGTCAGCCG CGAATTGGCC
CGCTTTGAGC AATTGGTGCA ACTCACGCTT TTTGAACGGG TACGTGGCCG CCTTTATCCT
ACCGTGCAAG GGCTACGGCT ATTCGAAGAG GTTCAGCGTT CATATTATGG TTTGGATCGT
ATCAAACAGG CGGCTGAAGG TATCCGCCAA TTTCAACATG CCCAACTCTC CATTGCCTGC
CTGCCCGTCT TTTCTCAATC GTTGCTACCC GCGGTATGTA AACCCTTTAT TGACCGCTAT
CCAGAGGTCA GCCTAAATGT CATTCCGCAG GAGTCACCTT TATTGGAGGA GTGGCTTTCA
GCCCAGCGTC ATGACTTAGG ACTCACAGAA AATATCCAAA CACCGGCGGG CACCCAGCGC
CATACCCTGA TGACGGTCAA TGAAGTTTGC GTATTACCTG CCGATCATCC GTTGCGGGAG
AAATCGGTGC TGACACCACA GGATTTTAAC GGGGAAAATT TTGTCAGCCT GTCAGTCACC
GACAGTTACC GTCAGCTATT GGATAACCTG TTTGCGGAGG AAAAAGTCAC CCGCCGATTA
GTCATGGAGA CCCACAGTGC GGCATCGGTT TGCGCCATGG TGCGTGAAGG GGTGGGGGTA
TCGATAGTCA ACCCCCTTAC CGCACTGGAT TACCTGAGTA AAGGCCGTGG TTCGGGGGTT
TGTGTACGGC CATTCAGTGT CGACATTCCT TTTACGGTTA GCTTAATTCA GCCATTACAT
CGCCCATCAT CCACCTTGGT CGATACGTTT GTCGGGCACT TAAAACAGCA GACAACGCTT
TTCCAACAGC GTCTGGCAAC AGTCATTGCC CCTGCGTGCT AA
|
|---|
| Protein sequence | MPAISLRQIE IFHGVMTTGN LTEAALLLQT SQPTVSRELA RFEQLVQLTL FERVRGRLYP
TVQGLRLFEE VQRSYYGLDR IKQAAEGIRQ FQHAQLSIAC LPVFSQSLLP AVCKPFIDRY
PEVSLNVIPQ ESPLLEEWLS AQRHDLGLTE NIQTPAGTQR HTLMTVNEVC VLPADHPLRE
KSVLTPQDFN GENFVSLSVT DSYRQLLDNL FAEEKVTRRL VMETHSAASV CAMVREGVGV
SIVNPLTALD YLSKGRGSGV CVRPFSVDIP FTVSLIQPLH RPSSTLVDTF VGHLKQQTTL
FQQRLATVIA PAC
|
|---|
| |