| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0958 |
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| Symbol | gspJ |
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| ID | 5385128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1147806 |
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| End bp | 1148402 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640863924 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001399942 |
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| Protein GI | 153948050 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.83965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAC GTCCAGATTG TGGATTTACT TTACTGGAGA TGCTACTTGC CGTTGTCATT
TTCTCAATGA TTAGTTTTAT TATTTATTCA TCCTTAAGAA TAACCATTAA AAGCAATAAT
GTCATGGGGA ATAAAGCACA AGAAATTATT AGGTTACATA GAGTTGTTAG CCTATTAGAA
CGAGATATTT CACATTCAGT CATGTCTACA GGATTACAAA ATGATTATTT TAGTAATGAA
GAACGTATTA TCGGTATAGG CGTACTTGAT AGTGACAGTT TTGGTATCCA TATGTTAAGA
AATAACAAAA TAAACACTGA GATATTTATT CATTATCAGC AGGAAAGACT CGGTTATCGA
GTGAAGAAAA ATTGCCTGGA AAGATTATCT TACTTAATTT TAAACAATAC AAATAAAGTA
GAGACTAAAT TCTCTTGCCT TATCGAAGGG ATAAATGATT TTCGTGTGAG AGTATTTCAT
CAAGGGAAAT GGTTAAATGA ATGGAGTAGG ATTGACCTTT CTCCACAAGC CATTGAAATC
ACCCTTGATG TTAAAAGTGT TGGGGTGATT AGGCGATTTA TTCTATTGCT ACATTAG
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| Protein sequence | MIKRPDCGFT LLEMLLAVVI FSMISFIIYS SLRITIKSNN VMGNKAQEII RLHRVVSLLE
RDISHSVMST GLQNDYFSNE ERIIGIGVLD SDSFGIHMLR NNKINTEIFI HYQQERLGYR
VKKNCLERLS YLILNNTNKV ETKFSCLIEG INDFRVRVFH QGKWLNEWSR IDLSPQAIEI
TLDVKSVGVI RRFILLLH
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