| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0947 |
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| Symbol | |
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| ID | 5385042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1134705 |
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| End bp | 1136891 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640863913 |
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| Product | putative autotransporter protein |
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| Protein accession | YP_001399931 |
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| Protein GI | 153949378 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAATA AATTTAAGGC GAATACTCTC GCCATAAGTA TCGCTGCTAT TTTATTGTCG
GTCTCTTTTA ATACACTTGC CGTAGTATGC CCACCAGAAG CGCCGGCTGG CAGTAGTTGT
GATGCGTTCA TCGCTAATGA TGGCAAGGCT GTGTCATTAG CTAATGATTT ATATATCACC
AATGGAAATG CATTAACTTA TTCAGGTAAC ACTCCCTTTG TAGCACAATA TTTGCGTAAA
AATATTATTG CCACCGGCAC GGATGCACAC GCTATTTATG CTGATGCAAA CACCGTATTC
AACAATAACA TTAACCTCGA AAGAGGTATT AGTATTATCA GCGAGAATGG TACAGCAATT
AAAATTGACG GTTCATTCTC TCACACAGCC GCAGCACCTA ACTTTGGTAT AGCCGTTAAA
GATGGCTCTA TTGTGAGAGG GAATGGTGCC GCTATCGATT TCCGTGATGC TCAAACAGCC
ATTCGTATGG ATATTAATGG CAGTATCTAT GGCGATATCC TGGGTAATGG GGTCACAGGA
AATAAAATTA ACTTTGCCTA TCAAGGCGCT ACAGCGAATG CCTTATTCGA TGGTTATACA
ATTTCAGGTG TTGAAAAATT AGAAAACTGG GGCAACCTGA GTATTATTGC AAAAGACAGA
ACCATCACTT GGAGTGGTGA TTTTACGAAT AAAAACAATG CATCCCTTGA CTTTAAAATT
GGTGATGAGG TGGATTTAGC ATCGCCCATT TTACTCGTTG AAGGTAAAAC AGTATTTAAT
ACAGGAAGTA AAGCCCTGTT CTCCTATGTG GGCAGTAATA TTAATGACAT CGTGAATAAA
GATATTATCC TGATCCAGTC CAATGGTGGG ATGAGCGGGC CAATTGATGT TGCCCAAAAT
GAAATCACCG TGGTCAGCAA CCTCTCGCCG TTATTAGCAC AGACAGATTC TTGGGTGACG
ACGACAGACC CCATAGTGAA CGGGGGAATA AGCGGTAACC AGTTAGTCGT ACGTTATGGT
GTGAACTACG AAGGTACCGA TAATTTCCTA GACCTGGCAC TTCAAGGTGG AGCTAATCAA
TATCAGCTCA ATGCAGCGAA TTATATTGTG AGTTATGCAC TCAGCCAATA CAACAAAACC
CAATCCGAAG CGAGTGGTGA ATTACTGGCA TTACTGACGT CAGCCGGTAA TAGTAGTGCA
GGTATTGCCA GTATAGCCGA TCAGATAACC CCTAATGCGG AAGGCGGTGA AGTCCGGGCT
GCATTACGGA TGGTAGATAA AATGCGCGAT CAAATAGATA ACCGCAGCCT CTATTTACGT
AATCAGTCAG CAGCAACTCC GTGGAATTTC TGGGCACAAA CCTTATACGC CCACAGCCGT
CAAAGCAGCG GGACTTATAC ACCGGGATAT CAAACCAATG GTTATGGCAT TAATGTCGGT
GTAGACCGCC GTTTTAATGA TGAATCACTA TTTGGTGTTT CTCTTGGCTA TCAGAATGCC
AATATTAACA TTCACAGCTA TGGCAATGAA AAAGATGTCG ATAGCTATGA ACTTATGGCT
TATACCGGCT GGTTTGATGA TCGTTACTTC TTCAATGGTA ACGTGAATAT GGGATATAAC
AGCAATAGCA GCACCCGCAA TATTGGTGAA AATACCGGTT ATCAAGGGAA TACAAAAGCA
ACGGCAGACT ATAACAGCTT ACAAATGGGT TATCAGGTCA AGGCTGGCAT GACCTTTGAT
TTGGATGTGG TGAAACTACA GCCAAGTGTT GCCTATAACT ATCAATGGCT TCGTGTGGAT
GACTATGCAG AGTTCGGCTC ACCGGCCAGT TTGGAAGTGG ATCGCCAATC TTATTCAGTA
AAACATTTAG GTGCTGGTTT AACCGCATTT AATACCTATG AGTTAGGAAT GGGTTTATTG
ACGCCGTCAC TGACATTAAT GGGTTACCGT GACCTGAATG ACACCGAGAT TATTGTCAAA
AAGGCCGGAT TAACCACAGA TCAGGGGAAA GGAAAAGGCC GTTTTATCGT TGAAGGTGAT
AGCGTCGGCA ATAATATTTT TGAAGCAAAA ATGAACTCTA ATTTGCAGTT AAAAAATAAT
CTTAGTCTGG ATGGAAATAT TAATTACTAC AAACGTGGTG ATTATAACGA AGGCTATATC
GGTCTGAGTG TTTCTAAACA CTTCTAA
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| Protein sequence | MHNKFKANTL AISIAAILLS VSFNTLAVVC PPEAPAGSSC DAFIANDGKA VSLANDLYIT
NGNALTYSGN TPFVAQYLRK NIIATGTDAH AIYADANTVF NNNINLERGI SIISENGTAI
KIDGSFSHTA AAPNFGIAVK DGSIVRGNGA AIDFRDAQTA IRMDINGSIY GDILGNGVTG
NKINFAYQGA TANALFDGYT ISGVEKLENW GNLSIIAKDR TITWSGDFTN KNNASLDFKI
GDEVDLASPI LLVEGKTVFN TGSKALFSYV GSNINDIVNK DIILIQSNGG MSGPIDVAQN
EITVVSNLSP LLAQTDSWVT TTDPIVNGGI SGNQLVVRYG VNYEGTDNFL DLALQGGANQ
YQLNAANYIV SYALSQYNKT QSEASGELLA LLTSAGNSSA GIASIADQIT PNAEGGEVRA
ALRMVDKMRD QIDNRSLYLR NQSAATPWNF WAQTLYAHSR QSSGTYTPGY QTNGYGINVG
VDRRFNDESL FGVSLGYQNA NINIHSYGNE KDVDSYELMA YTGWFDDRYF FNGNVNMGYN
SNSSTRNIGE NTGYQGNTKA TADYNSLQMG YQVKAGMTFD LDVVKLQPSV AYNYQWLRVD
DYAEFGSPAS LEVDRQSYSV KHLGAGLTAF NTYELGMGLL TPSLTLMGYR DLNDTEIIVK
KAGLTTDQGK GKGRFIVEGD SVGNNIFEAK MNSNLQLKNN LSLDGNINYY KRGDYNEGYI
GLSVSKHF
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