Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0939 |
Symbol | agaW |
ID | 5387837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1124052 |
End bp | 1124840 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863905 |
Product | PTS system, N-acetylgalactosamine-specific IIC component |
Protein accession | YP_001399923 |
Protein GI | 153947927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTTG AAGCTACGTT AGTCGGAATC TGGGCCTTCT TGTGCGGTAT CGACAAGTAT GACGTTGCCC TGAATATTCA CCGCCCGTTG ATCACCGGCC CAGTTGTCGG TTTGATCATG GGCAATATGG AAGTGGGTTT AATCGCAGGT GCAACACTGG AGCTGGCTTG GCTCGGCCTG GTACCGAATG CGGGGGCTCA GCCACCCGAT GTGACCATGG GGACTATCGC CGCAGTTGCC TTTGCGGTGA TGACCGGCCA GTCGCCAGAA GTGGCAATGG GCGTTGGTAT GCCAATTGCG GTCCTGATGC AGATGATTAT TATCGGTTTC TTTGCCATGA CAGCGTTCAC CATGGGCAGA GCAGATAAGT ATGCAGAGCA GGCAGATACG GCGGGCATAT CGCGCTTGTT GATAGGCACG CTACTCACCC GGTCGATGCT CTATTTTGTG ATCGCCTTTG TCACCGTCTA CTTCGGTGAA CATGCGGCAA CCTGGATTGA TGAAAATACA CCAACCGCCC TGTTAGAAGG CTTAGGTATC GGTGCGAAGA TGGTTCCGGC AATCGGCTTT GCTATGTTGC TGAAAATTAT GTGGTCGAAA GAAGTGGCTG GTGTGTTCTT TATCGGCTTT GTGATGACGA CTTACCTGAA ACTGCCAATC ATGGCTATCG CCATTCTGGG TGCTGCTGTT GCTGTCCTGT ACTACTTCTT CAGTGGCAAC AATAACGGCA GCAATAACAA CGGTAACAAC ACCAACAAAC AACCAGAGGA TTTCGAAGAT GGCATCTGA
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Protein sequence | MLFEATLVGI WAFLCGIDKY DVALNIHRPL ITGPVVGLIM GNMEVGLIAG ATLELAWLGL VPNAGAQPPD VTMGTIAAVA FAVMTGQSPE VAMGVGMPIA VLMQMIIIGF FAMTAFTMGR ADKYAEQADT AGISRLLIGT LLTRSMLYFV IAFVTVYFGE HAATWIDENT PTALLEGLGI GAKMVPAIGF AMLLKIMWSK EVAGVFFIGF VMTTYLKLPI MAIAILGAAV AVLYYFFSGN NNGSNNNGNN TNKQPEDFED GI
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