Gene YpsIP31758_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0938 
SymbolagaE 
ID5385953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1123172 
End bp1124062 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content51% 
IMG OID640863904 
ProductPTS system, N-acetylgalactosamine-specific IID component 
Protein accessionYP_001399922 
Protein GI153948367 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCTG ATATCACCGT AGATAAAGAC CACACGGCAA AAGCGAAAAC GGACAGCTTG 
GTGGACAAAA TTGATTCCTA TCAGGATCTT GAAGTTCGTA AAGTGGTTAC CCGTAAAGAT 
CTGTGGAAGT GCGCCATCCG TGGCCTGTTC ATGGAAGGTA ACTTTAACTT CGAACGTATG 
CAAGCCGGTG GTTTTGCTTA TTCGATGATC CCCGCGTTGA AGAAAATCCA CGGTAACAAC 
CGTGCAGATT TGGCGAAATC GCTAAAGAAC CATTTGCAGT TCTTTAATGC CAGTCCAAAG 
CTGTTCACCT TCCTGTTAGG CACTGCGGTG GCGATGGAAG AGAACAAAGA AAAGCCGTCA 
ATGATCAACG TAATGAAAGT TGCGGGCATG GGGCCAACAG GCGGTATCGG CGATGCCATT 
GACCACATGA CGCTAATGCC ACTGACGCTG GCACTGGGGG CTTCTATTGC GATTGAAGGC 
TCCATCGCTG GCCCATTTGT GTTCTTCATT CTGTACCAGA CTGTGCACTT CCTGGTCTAT 
TTCGGCCTGA TGTTTATGGG CTACCGCGCG GGCACGGCGG CAATGGTGAA CATGGGGGAT 
GCCACGGAGA AACTGGCAAA AGCCGCCAAT ATCATGGGTA TCTTTGTTAT CGGCGCGTTG 
TGCGCCACCT TTATCAGGCT ACAAACTACC GCGGCGATAG ATCTTGGCGG GAAAACAGTG 
GAGCTACAAA CCGCCCTGTT TGACAAGATC ATGCCGAATT TACTCCCGCT GGCATTGGTG 
TTCTTTATGT TCAAGATGGT GAAAGGCACG GGTTTCTGGG CGAAACCCCC GGTGTTGATT 
TTCTCCACGC TGGCGGCCGG GGTCGTCGGT CATCTGCTGG GCATTGTCTA A
 
Protein sequence
MASDITVDKD HTAKAKTDSL VDKIDSYQDL EVRKVVTRKD LWKCAIRGLF MEGNFNFERM 
QAGGFAYSMI PALKKIHGNN RADLAKSLKN HLQFFNASPK LFTFLLGTAV AMEENKEKPS 
MINVMKVAGM GPTGGIGDAI DHMTLMPLTL ALGASIAIEG SIAGPFVFFI LYQTVHFLVY 
FGLMFMGYRA GTAAMVNMGD ATEKLAKAAN IMGIFVIGAL CATFIRLQTT AAIDLGGKTV 
ELQTALFDKI MPNLLPLALV FFMFKMVKGT GFWAKPPVLI FSTLAAGVVG HLLGIV