| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0935 |
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| Symbol | kduD2 |
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| ID | 5386358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1120526 |
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| End bp | 1121281 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640863901 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001399919 |
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| Protein GI | 153948238 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTAT TTGATTTGAA GGGAAAAGTA GCAATTATCA CCGGATGTAA TACGGGGTTG
GGCCAAGGCA TGGCCATCGG CCTGGCAAAA GCCGGTGCAG ATATTGTTGG TGTGGGGGTC
GCTGAAGCCC CGGAAACCCA GGCACAGGTT GAAGCACTGG GGCGTAAATT CCACTTCATC
ACTGCTGACC TGATACAACA AAAAGACATT GATAGCATCG TCAGTCAGGC GGTGGAAGTG
ATGGGGCATA TTGATATTCT GATCAACAAC GCCGGGATCA TTCGTCGTCA GGACCTGCTG
GAGTTTGGCA ACAAAGATTG GGACGATGTG ATCAATATTA ACCAGAAAAC CGTGTTCTTC
CTGTCGCAAG CCGTGGCGAA ACAGTTTGTG AAGCAGGGCA ACGGCGGCAA GATCATCAAT
ATCGCCTCCA TGTTGTCATT CCAGGGGGGG ATCCGCGTGC CCTCTTACAC CGCCAGTAAA
TCCGCCGTCA TGGGCTTAAC CCGTGCATTG GCGACAGAGC TGTCGCAGTA CAATATTAAC
GTAAACGCGA TTGCGCCGGG TTATATGGCA ACCGATAACA CCGCCGCACT GCGCGCAGAC
ACCGCCCGCA ACGAGGCTAT TTTAGAGCGG ATCCCCGCGT CCCGTTGGGG AACACCGGAT
GATTTAGCGG GCCCGGCGAT TTTCCTTTCG TCCTCTGCCA GCGACTATGT GACCGGGTAT
ACATTAGCAG TGGATGGCGG CTGGCTGGCG CGTTAA
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| Protein sequence | MQLFDLKGKV AIITGCNTGL GQGMAIGLAK AGADIVGVGV AEAPETQAQV EALGRKFHFI
TADLIQQKDI DSIVSQAVEV MGHIDILINN AGIIRRQDLL EFGNKDWDDV ININQKTVFF
LSQAVAKQFV KQGNGGKIIN IASMLSFQGG IRVPSYTASK SAVMGLTRAL ATELSQYNIN
VNAIAPGYMA TDNTAALRAD TARNEAILER IPASRWGTPD DLAGPAIFLS SSASDYVTGY
TLAVDGGWLA R
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