Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0924 |
Symbol | |
ID | 5385386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1107442 |
End bp | 1109817 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863890 |
Product | glycosy hydrolase family protein |
Protein accession | YP_001399908 |
Protein GI | 153949651 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TAAAAAACTG GCTGTTAATC AATGAGTATC CCGATCACCT TGAACTGCGG GTCGATGACC GTCATATCTT TTGTCTGTAT GTATTAGAAC CAAACTTATG CAGGGTGCTG ATTAAACGCG AGGGTGAACT GGCACTGAGC CGCACCTGGA GTATTGCCCC GCAAGGTGAT GTGCCATGGT CAGGCCGCGA TCGCCTGAGT CTGGAAGGCT TCTCTCTCCC CGGTTATCAA TTGGAGAAAC ATGAACAGCA ACTGGTCGTC ACGACGGAGT GCCTTCGGGT CACCATCCAT CAACCACTGC ATCTGACATG GGAATATAAA AACCCGCCTG GTGAGTGGCT ACCGCTGGCC GCAGACCGGC CAACCAGCGC CTATCTACTC AGCCCTCAGG GAGAAGCGAT TGCTCACTAT CAGCGCCGTT ATCCCAATGA ACAATATTAC GGATTGGGCG AAAAAGCCGG TGACCTGAAC CGCGCAGGTC GTCGCTTTGA AATGCGTAAT CTGGATGCGA TGGGCTATAA CGCCGCCAGC ACGGACCCGC TCTACAAACA TATTCCGTTT ACTATCACCC GCCGTGATGA TGTCAGTTTT GGCCTTTTTT ATGACAATCT GAGTAGCTGT TGGCTGGATT TAGGCAATGA GATCGATAAC TACCATCTGG CCTATCGCCG TTATCAGGCC GAAGCGGGTG ACCTTGATTA CTATCTGTTC CTCGGCCCGA AAGTTTTGGA TGTCACCAAA GCGTTTGTCC GCCTGACCGG TAAAACCCAA TTTGGCCCTA AATGGAGCCT GGGTTACAGC GGTTCAACCA TGCATTACAC CGATGCCCCT GATGCTCAGG TACAACTGCA AAAGTTCATT GCATTGTGTC AGCAGCATGA CATCCCTTGC GATTCGTTCC AGCTCTCTTC CGGCTACACC TCCATCAAAA ACAAGCGTTA TGTCTTTAAC TGGAATTACG ACAAAGTGCC GCAACCGAAA GTCATGAGCC AGACGTTCCT ACAAGCAGGT ATCAAATTAG CCGCCAATAT AAAACCGTGT TTATTGCAAG ATCACCCACA GTATCAACAG GCTGCGGAGC GGGGGCTTTT CATTCGCGAC AGCGAAACTG ATTTACCTGA ACGCTCTACA TTTTGGGATG ATGAAGGCTC CCACCTTGAT TTCACCAATC CAGACACCGT GATCTGGTGG CAAGAGAACG TCACTAAACA GCTCTTGGAG ATGGGGATCG GTTCTACCTG GAATGATAAT AACGAATATG AAGTGTGGGA TGGTGAAGCC CGCTGTAATG GCTTCGGTAA ATCTATCGCC ATCAAACATA TCAGACCGGT AATGCCTTTA CTGATGATGC GAGCCTCAAT GGAAGCGCAG AAAGCATTCG CACCAGAAAT GCGCCCATAC CTGATATCCC GTTCAGGCTG TGCAGGGATG CAGCGCTACG CTCAGACCTG GAGTGGTGAT AACCGTACCA GTTGGCAAAC ACTGCGCTAT AACATCCGAA TGGGGCTGGG GATGAGCCTG TCAGGGCTGT ATAACCTGGG GCATGATGTC GGCGGTTTTT CTGGAGATAA ACCGGAACCT GAGCTGTTTG TCCGCTGGGT ACAAAACGGT GTGATGCATC CACGGTTTAC CATTCATTCA TGGAATGATG ACAATACAGT CAACGAGCCA TGGATGTATC CAGCCGCCAC GCCGATGATC CGGGATGCGA TGGCGTTACG ATATCGATTA TTGCCCTATT TTTACACATT GCAATGGCAG GCCAGCCATG ATGATGAGCC GATGTTGCGC CCTACGTTCC TCGACCACGA ACACGATAGC CTCACATTTA AAGAGAACGA TGACTTTATG CTAGGCCGTG ATCTGTTGGT TGCCAGTGTG GTGGACGCTG GGCAACGGCA ACGGCAGATT TATTTACCTG ATAATCAGGT CGGCTGGTAT TGCTTCCACA GCGGGCAATG GTATAGCGGT GGGCAGACAA TCACATTGGA TGCACCACTA GAGCGATTAC CTCTGCTGGT ACGCGCGGGG GCAGCCCTGC CGCTATCCCG ACGTATCGCC TTTGTTAATC CTGAGGCTGA TTGTCAGCGC GAATTGGCGC TTTATCCCAC TCAAGGTGGC GGGCAATCGA GCGGGATGCT ATTTGAGGAC GATGGTGAAA GCCACCGCTG GCAACAAGGC CATGCGCTAT GGCTAAGTTG GCAGGTCACC ACCGATAATC ACCGTATTGA TATCACCTTT AGCCGCACCG GGAACTATCA ACCGGCATGG CGTGAACTGA CGATTAATTT GCCAACAAAT GAAAGTCGCA CGTTATCAAT CAACGGTGTC GCAGGTAATA CACTGGATTT AACCAAACTG GCCTAA
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Protein sequence | MKTLKNWLLI NEYPDHLELR VDDRHIFCLY VLEPNLCRVL IKREGELALS RTWSIAPQGD VPWSGRDRLS LEGFSLPGYQ LEKHEQQLVV TTECLRVTIH QPLHLTWEYK NPPGEWLPLA ADRPTSAYLL SPQGEAIAHY QRRYPNEQYY GLGEKAGDLN RAGRRFEMRN LDAMGYNAAS TDPLYKHIPF TITRRDDVSF GLFYDNLSSC WLDLGNEIDN YHLAYRRYQA EAGDLDYYLF LGPKVLDVTK AFVRLTGKTQ FGPKWSLGYS GSTMHYTDAP DAQVQLQKFI ALCQQHDIPC DSFQLSSGYT SIKNKRYVFN WNYDKVPQPK VMSQTFLQAG IKLAANIKPC LLQDHPQYQQ AAERGLFIRD SETDLPERST FWDDEGSHLD FTNPDTVIWW QENVTKQLLE MGIGSTWNDN NEYEVWDGEA RCNGFGKSIA IKHIRPVMPL LMMRASMEAQ KAFAPEMRPY LISRSGCAGM QRYAQTWSGD NRTSWQTLRY NIRMGLGMSL SGLYNLGHDV GGFSGDKPEP ELFVRWVQNG VMHPRFTIHS WNDDNTVNEP WMYPAATPMI RDAMALRYRL LPYFYTLQWQ ASHDDEPMLR PTFLDHEHDS LTFKENDDFM LGRDLLVASV VDAGQRQRQI YLPDNQVGWY CFHSGQWYSG GQTITLDAPL ERLPLLVRAG AALPLSRRIA FVNPEADCQR ELALYPTQGG GQSSGMLFED DGESHRWQQG HALWLSWQVT TDNHRIDITF SRTGNYQPAW RELTINLPTN ESRTLSINGV AGNTLDLTKL A
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