Gene YpsIP31758_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0909 
SymbolrbsB1 
ID5386529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1090788 
End bp1091789 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID640863875 
Productribose ABC transporter, periplasmic ribose-binding protein 
Protein accessionYP_001399893 
Protein GI153947249 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAATGCTACA AACTCTGCTT GCTGCAACGC TGATACTTTC CTTTGCGGCA 
TCAGTGCAAG CAGCCCCAGT AAAAATTGCT ATTTTGATGT ATGGCATGAA AGCTGAATTT 
GTTCAGCTAA TGGAAAAGTC AGCCAAAGAA CATCCTGCGG TAACACAGGG GTTAACTACG 
TTGACTCTTT TCGATGGTCG CTATGATCCG TTAGTCCAGA ATAACCAAGC CGAAACTGCA 
ATACGTACCC GTTATGATGC CATTATTATT GTTCCGATAG ATTTTGAAGC CAACGTAGAT 
GTGGTCACGA TGGCGAATAA AGCCAATATT CCGGTGATTG TCGCCAATGC CCGCTTGAAT 
ACAGATAAAG CGACCAGTGG AATCTTCTCT GATGATGTCC AAGGGGGTTA TCTGGAAGCA 
AAAGCGGTGC TGGATAAAAT GCAGTGCCAG GGCAATGTGG TCGTTATTGA AGGACCTATC 
GGGCAATCCG CACAGATCCA GCGTGGTCAG GGCAACGATA AAGCGATTGC TGAATGTGGG 
CCTGGGAAAA TCAACGTACT GGAACGTAAA ACCGCCAACT GGTCACGTGC CGAAGCGATG 
CCGTTGATGG AGAACTGGCT ACAAAAACAT CGTGGCAAGA TTAATGGTGT GATCGGGCAG 
AATGATGAAA TGGCGTTGGG TGCCATTGAA GCGATCAAGA GCGCCGGCCT GAATGTCCAA 
GATTTTGCCA TTGCTGGTAT CGATGGTGTC TCTGATGCGA TCCGGGCGGT TAAACAAGGT 
GAAATGATGT CTATCCTGCA AGATGGCCAG GCTCAAATAC AAGGGGCTAT TGATATCGCT 
ATGCGTTCGG TGCAAGGAGA GCGTTACCAG CCTATGTCGA CGATCTGGCA ACAATATCAG 
GGAAAAATGG ATTGGCAACA AGGGACGGCA AAAATGTATG AAGTGCCTTG GACTGAAGTA 
ACACCACAAA ATGCGGATGA ACTGCTAAAA ATGCGTCAGT AA
 
Protein sequence
MKKTMLQTLL AATLILSFAA SVQAAPVKIA ILMYGMKAEF VQLMEKSAKE HPAVTQGLTT 
LTLFDGRYDP LVQNNQAETA IRTRYDAIII VPIDFEANVD VVTMANKANI PVIVANARLN 
TDKATSGIFS DDVQGGYLEA KAVLDKMQCQ GNVVVIEGPI GQSAQIQRGQ GNDKAIAECG 
PGKINVLERK TANWSRAEAM PLMENWLQKH RGKINGVIGQ NDEMALGAIE AIKSAGLNVQ 
DFAIAGIDGV SDAIRAVKQG EMMSILQDGQ AQIQGAIDIA MRSVQGERYQ PMSTIWQQYQ 
GKMDWQQGTA KMYEVPWTEV TPQNADELLK MRQ