| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0857 |
|---|
| Symbol | |
|---|
| ID | 5385627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1036479 |
|---|
| End bp | 1037075 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640863821 |
|---|
| Product | 5,10-methenyltetrahydrofolate synthetase |
|---|
| Protein accession | YP_001399841 |
|---|
| Protein GI | 153950067 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000000142389 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAA ATCCACAACA TGCCCTTGAG CGGCAACGTA TCCGCGCGGA AATCCGTGAG
CATCGGCGTC TGCTAACACC CGTTCAACAG CAACAATCGG CACATCTGGC GGCACAGCAC
ATTGCCGAGC ACCCCAAAAT CCAGCAAGCT CACACGGTAG CCGTGTTTCT CTCCTTTGAC
GGCGAACTTG ATACCCAGCC AATTATTGAG CAACTGTGGC AGCAGAAAAA ACAGGTTTAT
TTGCCTGTCC TCCACCCGTT TAGCCCCGGT AATTTATTAT TTCTGCGCTA TCGCCCAGAA
AGCCCGCTAA CCCGCAACCG ACTGAAAATC CTTGAACCCC AACTCGATGT GCGAGAAGTC
TTGCCATTGC ATCAACTCGA TGTAGTGATT ACCCCATTGG TCGCCTTTGA TCGCCATGGT
CAGCGTTTGG GGATGGGGGG CGGTTTTTAT GACCGAACTC TGCAACGCTG GCAGCAAAAT
GGCCCTTATC CTATTGGATT GGCCCATGAT TGCCAGTTGG TCGATAAGTT ACCGAGTGAA
TATTGGGATG TGCCGTTGCC AGAGATTGTG ACACCAGCAA AAGTGTGGCA GTGGTGA
|
|---|
| Protein sequence | MPQNPQHALE RQRIRAEIRE HRRLLTPVQQ QQSAHLAAQH IAEHPKIQQA HTVAVFLSFD
GELDTQPIIE QLWQQKKQVY LPVLHPFSPG NLLFLRYRPE SPLTRNRLKI LEPQLDVREV
LPLHQLDVVI TPLVAFDRHG QRLGMGGGFY DRTLQRWQQN GPYPIGLAHD CQLVDKLPSE
YWDVPLPEIV TPAKVWQW
|
|---|
| |