Gene YpsIP31758_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0848 
Symbolepd 
ID5386813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1025944 
End bp1026960 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID640863812 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_001399832 
Protein GI153948190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.778213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCC GCATAGCGAT AAACGGCTTT GGCCGTATTG GTCGTAGCGT TTTACGCGCG 
TTGTATGAAT CAGGTCGTCG GGCAGAAATT TCGGTGGTTG CAATCAATGA GTTGGCGAGT 
GCGGAAGGGA TGGCCCATCT GCTGAAGTAT GACTCCAGCC ATGGCCGGTT CGCTTGGGAT 
GTTCGTCAGG AATGTGATTC ATTGTATGTC GGGGACGATA TTATCCGGCT GATTCATCAG 
TCAGAGATTG AGCAGTTACC CTGGAGTGAG TTAGGAATAG ATGTGGTTCT GGATTGCAGC 
GGTGTGTATG GCAGCCGTGA GGATGGCGAG GCGCATGTAG CCTCCGGTGC AAAAAAAGTG 
CTGTTTGCCC ATCCTGGCGG TCATGATTTG GATGCGACTG TAGTCTATGG TGTTAATCAT 
CAGGATTTAC GGGCAGAGCA CCGGATTGTG TCCAACGCCT CCTGTACGAC GAACTGCATT 
ATTCCTATTA TTCAGTTGTT GGATATTGCT TATGGCATTG AATCTGGCAC TGTCACTACC 
ATTCATTCGT CAATGAATGA CCAGCCGGTT ATTGATGCTT ATCATCAGGA TTTACGTCGT 
ACACGAGCAG CCAGCCAATC CATCATTCCT GTGGATACCA AACTGGCGGC AGGTATTACC 
CGCATTTTTC CGAAGTTTTG TGACAGGTTT GAGGCTATCT CGGTACGGGT ACCGACCATC 
AACGTTACGG CTATCGATTT AAGCGTCAGC GTTACTCATC CTGTCGGCGT GGCGGAGGTT 
AACCAGCTTT TGCAAAAGGC AGCAAGAGGT GCATTTCGTG GTATAGTTGA CTATACGGAA 
TTACCATTGG TGTCGATGGA TTTTAACCAC GATCCGCACA GTGCTATTGT CGATGGCACC 
CAGACGCGGG TGAGTGGGCA GCACCTGATT AAGACGTTGG TATGGTGCGA TAATGAATGG 
GGCTTCGCCA ATAGAATGTT GGATACGACA TTGGCGATGG CCAAAAGCGG TTTCTAG
 
Protein sequence
MAIRIAINGF GRIGRSVLRA LYESGRRAEI SVVAINELAS AEGMAHLLKY DSSHGRFAWD 
VRQECDSLYV GDDIIRLIHQ SEIEQLPWSE LGIDVVLDCS GVYGSREDGE AHVASGAKKV 
LFAHPGGHDL DATVVYGVNH QDLRAEHRIV SNASCTTNCI IPIIQLLDIA YGIESGTVTT 
IHSSMNDQPV IDAYHQDLRR TRAASQSIIP VDTKLAAGIT RIFPKFCDRF EAISVRVPTI 
NVTAIDLSVS VTHPVGVAEV NQLLQKAARG AFRGIVDYTE LPLVSMDFNH DPHSAIVDGT 
QTRVSGQHLI KTLVWCDNEW GFANRMLDTT LAMAKSGF