Gene YpsIP31758_0847 details

Gene Information

• Locus tag: YpsIP31758_0847
• Symbol: tkt
• ID: 5387659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1023553
• End bp: 1025547
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640863811
• Product: transketolase
• Protein accession: YP_001399831
• Protein GI: 153947526
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCTC GTAAAGAGCT TGCCAACGCT ATCCGCGCAC TAAGCATGGA TGCCGTGCAA 
AAAGCGAAGT CCGGCCATCC CGGAGCCCCG ATGGGTATGG CAGATATTGC CGAAGTCCTG 
TGGCGTGATT ATCTGAACCA TAATCCAACT AACCCACACT GGGCTGATCG TGACCGTTTC 
GTCCTGTCAA ATGGTCACGG CTCCATGTTG ATTTATAGCC TGTTGCATCT CACAGGTTAT 
GACCTGCCGA TGGAAGAGCT AAAAAATTTC CGCCAACTGC ACTCTAAAAC GCCTGGCCAC 
CCTGAATATG GTTATACCGC TGGTGTAGAA ACCACCACTG GGCCATTGGG GCAAGGCATT 
GCCAATGCTG TTGGTTTTGC TATCGCAGAA CGCACGCTGG GAGCGCAGTT TAACCGCCCA 
GGTCACGACA TTGTTGATCA CCATACCTAC GCCTTTATGG GCGATGGTTG CATGATGGAA 
GGTATCTCTC ACGAGGTTTG CTCGCTGGCC GGTACGATGA AGCTGGGCAA ACTGACGGCT 
TTCTATGATG ACAACGGTAT TTCTATCGAT GGTCATGTTG AAGGCTGGTT CACTGATGAC 
ACGGCTGCCC GTTTCGAAGC CTACGGCTGG CATGTGGTAC GTGGTGTTGA TGGTCATAAC 
GCGGACGCCA TCAAAGCGGC TATCGAAGAA GCCCATCAGG TTACCGACAA GCCTTCATTG 
TTGATGTGCA AAACGATTAT CGGTTTTGGC TCACCAAACA AAGCTGGCAC CCATGATTCC 
CATGGTGCGC CATTAGGTGA AGCGGAAGTT GCAGCAACCC GTGAAGCATT AGGTTGGAAA 
TACCCGGCAT TTGAAATCCC ACAAGATATC TATGCGGCAT GGGATGCCAA AGAAGCGGGC 
AAAGCCAAAG AAGCGGCCTG GAACGAGAAG TTTGCTGCGT ATGCCAAGGC TTATCCAGAA 
CTGGCGGCTG AATTCAAACG TCGTGTCAGC GGTGAATTAC CGGCTAACTG GGCCGTTGAA 
TCCAAGAAAT TCATCGAACA ATTGCAAGCC AATCCAGCAA ATATTGCCAG CCGCAAAGCC 
TCACAAAATG CGCTGGAAGC CTTCGGTAAA GTGTTACCTG AGTTCCTGGG CGGTTCTGCT 
GACCTGGCAC CGAGTAACCT GACTATCTGG TCTGGCTCTA AATCCTTGAG CGACGATCTG 
GCTGGTAACT ACATTCACTA CGGTGTCCGT GAATTTGGTA TGTCTGCCAT CATGAACGGT 
ATTGCCCTGC ACGGCGGTTT CATCCCTTAC GGCGCAACCT TCCTGATGTT TGTGGAATAT 
GCCCGTAATG CAGTGCGCAT GGCGGCACTG ATGAAAATCC GTAGCGTGTT CGTTTATACC 
CATGACTCTA TTGGTCTGGG CGAAGATGGC CCAACCCATC AGCCTGTTGA ACAGATGGCC 
AGCCTGCGTG TTACCCCGAA TATGAGTACC TGGCGTCCTT GTGATCAGGT CGAATCTGCA 
GTGGCATGGC AGTATGCGCT GGAACGTAAA GATGGCCCAA GCGCACTGAT CTTCTCTCGA 
CAGAATCTGG CACAGCAGCC ACGTACTGCG GAGCAGCTAG CCAATATCGC CAAAGGCGGG 
TATGTGCTGA AGGATTGTGC AGGCCAGCCT GAACTGATCC TGATTGCTAC CGGCTCTGAA 
GTGGAGTTAG CAGTTGCTGC GGCTGATCAA CTGACGGCCA CTGGCCGTAA AGTCCGCGTT 
GTCTCTATGC CATCAACTGA TGCATTCGAT AAACAAGATG CGGCTTACCG TGAGTCAGTA 
TTGCCATCTG CGGTTAGCGC ACGTGTTGCC GTAGAAGCGG GTATTGCGGA TTATTGGTAC 
AAATACGTTG GCCTGAATGG CGCGGTTGTC GGTATGACCA CGTTTGGTGA ATCAGCGCCA 
GCTGAATTGC TGTTCAAAGA GTTTGGTTTC ACCGTGGAAA ACGTGGTGGC GAAAGCTCAG 
GCGCTGCTGA AGTAA 

 

Protein sequence

MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDYLNHNPT NPHWADRDRF 
VLSNGHGSML IYSLLHLTGY DLPMEELKNF RQLHSKTPGH PEYGYTAGVE TTTGPLGQGI 
ANAVGFAIAE RTLGAQFNRP GHDIVDHHTY AFMGDGCMME GISHEVCSLA GTMKLGKLTA 
FYDDNGISID GHVEGWFTDD TAARFEAYGW HVVRGVDGHN ADAIKAAIEE AHQVTDKPSL 
LMCKTIIGFG SPNKAGTHDS HGAPLGEAEV AATREALGWK YPAFEIPQDI YAAWDAKEAG 
KAKEAAWNEK FAAYAKAYPE LAAEFKRRVS GELPANWAVE SKKFIEQLQA NPANIASRKA 
SQNALEAFGK VLPEFLGGSA DLAPSNLTIW SGSKSLSDDL AGNYIHYGVR EFGMSAIMNG 
IALHGGFIPY GATFLMFVEY ARNAVRMAAL MKIRSVFVYT HDSIGLGEDG PTHQPVEQMA 
SLRVTPNMST WRPCDQVESA VAWQYALERK DGPSALIFSR QNLAQQPRTA EQLANIAKGG 
YVLKDCAGQP ELILIATGSE VELAVAAADQ LTATGRKVRV VSMPSTDAFD KQDAAYRESV 
LPSAVSARVA VEAGIADYWY KYVGLNGAVV GMTTFGESAP AELLFKEFGF TVENVVAKAQ 
ALLK