Gene YpsIP31758_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0803 
Symbol 
ID5387600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp964768 
End bp965217 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content53% 
IMG OID640863766 
Producthypothetical protein 
Protein accessionYP_001399787 
Protein GI153950743 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGACG CCTCCTCGCC GTCACTGTAT GAGCAATTGC TGGGCAATTT CACTGGCGGG 
CTTGAACTGC ATCAGGTCAG TGAAGCTAAT CAGGTCATTC TCTCGGTGCT CGATAATATG 
CAGCGCATTC TCAATTGCCG GGCGGGGACA CTCAGTCATC TGCCCGATTA TGGTCTGCCA 
GATATGAGTG AAATCCTGCA AGGGCTACCG GGCAGCGCAC ACGCGCTGTT GACCACTCTA 
TCCACTGCAT TGCTGAAATA CGAGCCGCGT CTGAAAAGTT TGCAGGTGTT GCTGTTACCG 
CAGACCGCTC CCGGCCATCT GGAGTACGCC ATTGAGGCGG AACTGAAAGG TCTGGGACTG 
GTGCGTTATG GCACGGCATT TATGCCAGAA GGCCGGGTGT TGATTCGTCA TCTTAAACAG 
CAGTATCTTG ATAAAACAAT GGGAGTCTGA
 
Protein sequence
MPDASSPSLY EQLLGNFTGG LELHQVSEAN QVILSVLDNM QRILNCRAGT LSHLPDYGLP 
DMSEILQGLP GSAHALLTTL STALLKYEPR LKSLQVLLLP QTAPGHLEYA IEAELKGLGL 
VRYGTAFMPE GRVLIRHLKQ QYLDKTMGV