| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0800 |
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| Symbol | |
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| ID | 5386030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 961400 |
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| End bp | 963163 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640863763 |
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| Product | hypothetical protein |
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| Protein accession | YP_001399784 |
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| Protein GI | 153950751 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACT TAACCCTGCG TTATTTTGAC GCTGAAATGC GCTACCTGCG TGAAGCGGGC
GAAGAGTTTG CCCGCGCGCC CCCTGATCGG GCTGCCGGAT TAAATCTGGA TAAAGCCGGG
GCGCGTGACC CCTATGTGGA ACGCCTGTTT GAAGGCTTTG CCTTCCTGAT GGGCCGCATG
CGAGAAAAAC TGGATGATGA CCTGCCGGAG CTGACCGAAG GGTTGGTCAG CCTGCTGTGG
CCGCACTACC TGCGCACCAT TCCGTCGCTT GCCATTGTGG AGTTCACCCC ACAATGGCAG
GGGATGAAAG AACGCATGGG GGTGAGCAAA GGTTTTGAAG TGCTTTCCCG CCCCATTGGC
GAGCGTGAAA CCCGTTGCCG CTACACCACC ACGCAGGATA TGGACTTGCT CCCGCTGACA
TTGAGCCGAG CCAAATTGGA CAGTGAACCC GATGGCCGGT CGGTTATCCG GCTGCGCTTT
GATTGCAGCG CGCTGGCCGA CTGGAGCCGT ATCAACCTGA GCCGCCTGCC GCTCTATTTT
GATGCCGATG CGCCGCTGGC CTGCGCCCTG CATGAGGCGC TGACCCTGAA TACCGCCAAA
CTCTGGATCC GGTTGCCGGG GCAGGCTGAT CGCCAGCCGC TGGACGGCCA TTTCGCGCCG
CTGGGGTTCG GGGAGCAGGA TACACTGTGG CCGAAGGCCG ACAGTGCGTT CAGTGGTTAT
CAGCTCTTGC TGGAGTACTT TACCTTCCGC GAAAAGTTTA TGTTTGTCGC GTTGCAGGGG
CTGGATGGGA TCGAGCTGCC GGCGGAACTG CCGTGGTTTG AGATTGATGT GGTGCTGGAA
AAACGCTGGC AACATGATTT CTCGTTCTCC GAAAAGAACC TGCGCCTGCA TTGTGTGCCG
GTGATTAACC TGTTCCCGCT GGAATCGGAC CCGCTGTCAC TTTCTTCATT ACAGACCGAA
TACCTGCTGC GCCCAATGCG CATTCAGGAC GGTTATACCG AAGTGTATTC GGTGGACTCG
GTGATCTCCT CGCGTCATAC CGGGCATCAG GTCTATGTCC CGTTCACCAG TTTTCGCCAT
AAAGGCGGGA TGCTGCGCCA TGATGCGCCG GAATATTACT ACCATACGCG GGTCAAACGC
GGGCCTTCGG GGTTGCACGA TACCTGGCTG GTGCTGGGGG GCGAGGCGTT TGATAACCAC
AGCGTCCCGG ATAATGAAAA TTTGTCGCTG AGCCTGACCG GCACTAACGG GCAGTTACCG
CGTAAAGCGC TGCAAAGCAC GGTGCTGGAT ACGGCGGTGA AATCCACCGG GGCTCAGGTG
CGGGTGCGTA ATCTCTCCGC GCCGTCATTG CCATGCTACC CGCCGAACCG CGACCGTTTT
CACTGGCGGG TGTTGAGCCA TCTGGGCAGC AGTTTTCTGT GGATGATGGA TAACGCTGAA
GTGCTGCGCG GAACGCTGGC GCTGTATGAC TGGACGGACA ACGAAATGAA CCGCCGTCGG
CTGGAGGCTA TCGCTGAGGT CAAACACAGC GAGATTGAAC GCTTTGAACG GGGTTACTTG
CTGCGCGGGG TACACATTGA AATCACCCTC GACAGTAACG GCTTTACCGG TACCGGGGAT
ATTTGTCTGT TTGGGGAAAT GCTCAGTCGC TTCTTTGCCC TGTATACCGA TATTCATCTG
TTTAATCGCC TGACTCTGAT ACTGCAACCG ACAGGAGAAC GTTTGGAATG GGAAGAGAAT
CACACGACCC GAATTCCCGG CTGA
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| Protein sequence | MDDLTLRYFD AEMRYLREAG EEFARAPPDR AAGLNLDKAG ARDPYVERLF EGFAFLMGRM
REKLDDDLPE LTEGLVSLLW PHYLRTIPSL AIVEFTPQWQ GMKERMGVSK GFEVLSRPIG
ERETRCRYTT TQDMDLLPLT LSRAKLDSEP DGRSVIRLRF DCSALADWSR INLSRLPLYF
DADAPLACAL HEALTLNTAK LWIRLPGQAD RQPLDGHFAP LGFGEQDTLW PKADSAFSGY
QLLLEYFTFR EKFMFVALQG LDGIELPAEL PWFEIDVVLE KRWQHDFSFS EKNLRLHCVP
VINLFPLESD PLSLSSLQTE YLLRPMRIQD GYTEVYSVDS VISSRHTGHQ VYVPFTSFRH
KGGMLRHDAP EYYYHTRVKR GPSGLHDTWL VLGGEAFDNH SVPDNENLSL SLTGTNGQLP
RKALQSTVLD TAVKSTGAQV RVRNLSAPSL PCYPPNRDRF HWRVLSHLGS SFLWMMDNAE
VLRGTLALYD WTDNEMNRRR LEAIAEVKHS EIERFERGYL LRGVHIEITL DSNGFTGTGD
ICLFGEMLSR FFALYTDIHL FNRLTLILQP TGERLEWEEN HTTRIPG
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