| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0788 |
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| Symbol | |
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| ID | 5385401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 947132 |
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| End bp | 949834 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640863751 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001399772 |
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| Protein GI | 153950285 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCT CTCTCCCCGC TATTCGGTTT GACCATAGCC ATCACAAACT GGTGGTCCGC
GACAGCACGG CTCCCGTCGA TGTGCTGGGT TTTGAAGGCC ACGAAAGCTT AAGTCAGCCG
TTCTGTTACG ACATTCAATT TACCAGCGCA GACAAGGCGA TTGACCCGGC CACGATGCTG
ATGCAGGACG CGTCACTGAC ATTGGCGGCC CCGGTGGCCG AAGCCTTTGG CGTGACGGTT
CAGCAGACCC AGCGGGTGAT CCACGGCGTG GTGACCGGAT TTAAACGCCT GTCTGCTTCA
AAAGATGAAT GCCGTTACGA ACTGAGCCTG CAACCGCGTT TGGCTTTGTT GTCGCGTAGC
CATCAGAACG GGATTTATCA GGACATGTCG GTGCCGCAGA TTGTGGAAAA AATTCTGCGT
GAGCGCCATG ACATGCGCGG TCAGGATTTT GTCTTCACGC TGGCCCGCGA GTACCCCCGC
CGTGAGCAGG TGATGCAGTA CGGCGAAGAT GACCTGACCT TTATCAGCCG CCTGCTGGCG
GAAGTGGGGC TCTGGTTTCG TTTTACCGCT GACCCCAAAC TCAATATTGA TGTGGTGGAG
TTTTACGACG ACCAACGTTT TTACCCGCCA GGGCTGACGC TACAAGCGGT GCCACCTTCG
GGGATGCACG ACAGCGGCGT GGAGTCGGTC TGGGACTTGT CCAGTGCTCA TCAGGTGGTT
GAAAAATCGG TCAGTACCGG CGATTACAAC TACCGCACCG CCACTGCCGA TATGACGGCC
GGGGCAGACA TCACTCGCGG TGATACCACC ACCTACGGCG AAGCTTATCA TTACGCCGAT
AACTACCTGA TCGCAGGCAG CGAAGAGCGT GAGCCGGAAA GTGAAAGTGG GGCGTTTTAT
GCCCGCCTGC GCCATGAACG TTACCTGAAC AATCAGGCGC GCTTTTCGGG GGTAGCCAAT
GCGGCGACAC TGGGGCCGAG TCAGGAACTG AAAGTCACCG GAAACGATGT GCCGGCACAG
TTTGGTAAAG GGGTGATAAT CATCCGCATC ACCAGCTATG CCCGCCGTGA CCGCAGCTAT
GAAGTGCATT TTGAGGCTAT CCCTTACTCC GAAGATTATT GCTTCCGTCC AGCACTTATC
CGCAAGCCGA CCATGGCCGG GACCTTGCCG GCGCGGGTGA CCAGTACCAC TGCGAACGAC
ACCTATGGTC ATATCGACAA AGACGGGCGT TACCGTGTCA ATCTGATGTT CGACCGTGAC
AGTTGGGAGC AGGGTTACGA AAGCCTTTGG GTTCGTCAGG CCCGCCCGTA TGCGGGTGAC
ACCTACGGCC TGCACCTGCC GCTGCTGGCG GGCACCGAAG TGGCGATTGC GTTTGAGGAT
GGCAACCCGG ACCGGCCCTA TATTGCTTAT GTGTTGCACG ACTCGGCGCA CGGCGACCAT
GTCACCATCA GTAATTACAA ACGCAACGTA CTTCGCACTC CGTCGAATAA CAAACTGCGC
CTTGAAGATG AACGGGGCAA AGAGCACATC AAGCTCAGCA CCGAATACGG CGGCAAAAGC
CAGTTGAATC TGGGGCATTT GGTTGATAAC GAGAAACAGC CACGGGGTGA AGGTTTTGAG
CTGCGTACCG ACAGTTTTGG TGCATTGCGT GCAGAAAAGG GCCTCTTTAT CAGTGCCGAC
GGTCAGGCCA AAGCCCAGGG GCAGGTGCTG GAGATGCAAC CGGCTATTAG CCTGTTGCAA
GGTGCTCAGG AACAGATGGA TGCCATCTCC GCGGATGCAC AAACCGCCAC CGCCAGTCCG
GCCGACCTGC AGGCACAAAT CAGTTTGTTG CAGCAAAATC TGAGTGAGCT GAAACAAGCC
GTGGTATTGC TGAGTGCGCC AAAAGGCATT GCCTTGAGCA GTGGTGAGCA TCTGCAAATG
TCCGCCAGCG AAAATCTGAT AGCCACTGCC GGTAAGAATA CCGACATCAG CGTAGCAAAG
AACTTATTTA TTGGTGTGGG AAATACCTTA AGTATCTTCG TCAGAAAACT GGGGATGAAG
CTGATAGCCA ATCAGGGGCC GATAACAGTC CAGGCGCAGA ATGATCTGAT GGAGTTATTG
GCGCGCAAGG CGATAACGAT CACCAGTACC GAGAATGAGA TAAAAATCAC CGCCAAGAAG
AGGATTACGC TGAATGCGGG CGGCAGTTAT ATCACGCTGG ATGAGAATCG GATTGAGTCA
GGCACGGCTG GTGAATATAT AACCAAAGCA GGGCATTACG AGCGGCAGGA AAAGGCGAGT
TTAAAATCTA TAATACCTGC TTTTCCTATT ATTGAACCGG GAGAACATAG TTTACGGTTT
GCATTCTATG GTGACGATAA TGTTATTGGG TCTATGGGAC ATCTTGTCGG GCAGCCTTAC
AATATCCGTA ATAGCGCTGG TGAAGTTATA GCTTCAGGAG TATTGGATCA ATCTGGCCGT
TTCCCAAGAG TAAAAACTCA AGAAGCGGAT GAGTTAACGC TGACTTTAGG TGAGGAAAAA
TGGACAGTAG AAGAGCTTAT AGCGTCAACA GAAGATCCTA TCGGTGAGGA GTTTAGCGAA
CCTGATGAAT ACGATGTAGA TAGTGATCCT TATTTCGAAA ATATCGCTCA AGAACAACAA
AGTAATAGAT TGCCTGATAC AATAATTAAT AAATTTATTG GCTATGTAGA AGAGGATATC
TAG
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| Protein sequence | MNTSLPAIRF DHSHHKLVVR DSTAPVDVLG FEGHESLSQP FCYDIQFTSA DKAIDPATML
MQDASLTLAA PVAEAFGVTV QQTQRVIHGV VTGFKRLSAS KDECRYELSL QPRLALLSRS
HQNGIYQDMS VPQIVEKILR ERHDMRGQDF VFTLAREYPR REQVMQYGED DLTFISRLLA
EVGLWFRFTA DPKLNIDVVE FYDDQRFYPP GLTLQAVPPS GMHDSGVESV WDLSSAHQVV
EKSVSTGDYN YRTATADMTA GADITRGDTT TYGEAYHYAD NYLIAGSEER EPESESGAFY
ARLRHERYLN NQARFSGVAN AATLGPSQEL KVTGNDVPAQ FGKGVIIIRI TSYARRDRSY
EVHFEAIPYS EDYCFRPALI RKPTMAGTLP ARVTSTTAND TYGHIDKDGR YRVNLMFDRD
SWEQGYESLW VRQARPYAGD TYGLHLPLLA GTEVAIAFED GNPDRPYIAY VLHDSAHGDH
VTISNYKRNV LRTPSNNKLR LEDERGKEHI KLSTEYGGKS QLNLGHLVDN EKQPRGEGFE
LRTDSFGALR AEKGLFISAD GQAKAQGQVL EMQPAISLLQ GAQEQMDAIS ADAQTATASP
ADLQAQISLL QQNLSELKQA VVLLSAPKGI ALSSGEHLQM SASENLIATA GKNTDISVAK
NLFIGVGNTL SIFVRKLGMK LIANQGPITV QAQNDLMELL ARKAITITST ENEIKITAKK
RITLNAGGSY ITLDENRIES GTAGEYITKA GHYERQEKAS LKSIIPAFPI IEPGEHSLRF
AFYGDDNVIG SMGHLVGQPY NIRNSAGEVI ASGVLDQSGR FPRVKTQEAD ELTLTLGEEK
WTVEELIAST EDPIGEEFSE PDEYDVDSDP YFENIAQEQQ SNRLPDTIIN KFIGYVEEDI
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