| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0781 |
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| Symbol | |
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| ID | 5385709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 937113 |
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| End bp | 938834 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640863745 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001399766 |
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| Protein GI | 153950607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCGT TGTGGCGATA TGGGTTATGG CTATGGGCGG GTCTTCTGGC GGGCATATTG
TGTCTGGCGT TCTTGCCTTT CTCCCCGTTA GTCGGCTGGC TTATGTTGTT GCCGGTTGCC
CTTATTTGTC TGGTGGGGAT AGGGCGGGCG CGGCGTCAAC CGAACAGGGC ATTCTCTGAA
CCGCTATTCT CCGGACTAGC ATCCGAAAAT CCGCTTCCAC CTGAAAACCA CCGTTTACCG
GTGGTGTTGG TCTGCGGTGA TGGTCTGACG TCATTATTTG GCACCGAGAG GATGCTGCAG
ACTGCGCAAG GCTGCTGGCT ACGAGTGGAT GAGATAAACA GCCTACAACT GTTTACCCGA
CAGCTACTGT GGCAACGGCC GGAATGGGCC GCTCAGTTGG CGGTGATGAT GGTGGTGAAC
CCGCAGCAAC GCAGCGATGA ACGCCAGCTG GCAGCCGATT TACAGGAGCT GCGTTGGCAA
CTGATGCAAC TGTGTAGCGA TACCCGCCAT CGCATTCCCT TACTGGTGAG TAGCACGGTG
GCCACACTGA TGGCCCATGA TGCGGTTTGG TTGTCACAAC AGCAAACTCC GCCGCTGACG
CTCTGGTCAA CCGTCTCGAC GCCGGGATCT CTGGCCGACT GGCAGCGCAC ACAAAGCAAT
GTTGTACAGG CGGAACGACT GAAACAGACG GTGTTGTTCA GCTGCCATCA TGACTGGCTG
AAAGCACAAG TGCTCCCGGT GTTGCAGGCG CGCAATGAGG ATGTGGCACC GGTCGCTGTA
CAGCAGATTA TTCAGCAGCA GGTTGCTGGT CTGCCAGATA TAGAGCAAAG CTCCCTCTGG
CAACATTGGC TAACCGCCCA TACCTCGCTG ACACAGGTGT CCGGTTGGCA TCCACCGTCG
ACGGCTGCGC ATGACGTATT ACCCTTGCCG GATTTTGTTT TTTCAGTGCT TCCCCTCGGC
AGTGGCGTGT CGTCACGCCG TCGGGTGCTG CGCCATAGCG TCACCTTACT GACGCTGGCG
GCGATGGTGG CTTTGTGCAG CAGTGCCTGG CAAAACCGGC AACTGTTGCA GCGGGTGACC
TTTGATATCC GCCATTACTA CAGCGTCGCC ATGACCGATC ACGCCCCTAA AGCGCAGGCC
GTTGCGGTAT TACGGGGTGA TGCGGAGGAA CTTGATAACG AGTTCCGCAA TGGTGAGCCG
CTGCGTCTGG GACTGGGTTT GTATCAAGGA TGGCGTCTGC GACTGCCTTT ACTGGCCGCA
GTGAAAACTT ATGTGCCACC ACCGCCTGCG ATAGATAAAG AAACACCCAC TACAGTCCGC
CTTGATAGCC TGTCACTGTT TGATGTGGGC AAATTCCAGC TCAAACCCGG CAGCATCAAG
ATGCTGGTTG ATGCATTGAT GAATATCAGA GCCAAACCCG GCTGGCTGAT TGTGGTCGCC
GGGCATACCG ACATTACCGG TGATGCACAG GCCAACCAAA TTCTGTCGCT TAAGCGCGCC
GAAGCATTAC GCGACTGGAT GCTATCAACC AGCGACGTCT CGCCGACCTG CTTTGCGGTG
CAAGGCTACG GGGCGACACG CCCGGTCGCG ACTAACGAGT CAGCGGAAGG CCGCGCGGCC
AACCGCCGTG TCGAAATTAG TCTGGTACCG CAGGCTGATG CCTGTCAGGT GCCAGAAACA
GTAAACCGGT CGCAGGAACA CGCGACCTCA CTCAGTAAGT AA
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| Protein sequence | MSPLWRYGLW LWAGLLAGIL CLAFLPFSPL VGWLMLLPVA LICLVGIGRA RRQPNRAFSE
PLFSGLASEN PLPPENHRLP VVLVCGDGLT SLFGTERMLQ TAQGCWLRVD EINSLQLFTR
QLLWQRPEWA AQLAVMMVVN PQQRSDERQL AADLQELRWQ LMQLCSDTRH RIPLLVSSTV
ATLMAHDAVW LSQQQTPPLT LWSTVSTPGS LADWQRTQSN VVQAERLKQT VLFSCHHDWL
KAQVLPVLQA RNEDVAPVAV QQIIQQQVAG LPDIEQSSLW QHWLTAHTSL TQVSGWHPPS
TAAHDVLPLP DFVFSVLPLG SGVSSRRRVL RHSVTLLTLA AMVALCSSAW QNRQLLQRVT
FDIRHYYSVA MTDHAPKAQA VAVLRGDAEE LDNEFRNGEP LRLGLGLYQG WRLRLPLLAA
VKTYVPPPPA IDKETPTTVR LDSLSLFDVG KFQLKPGSIK MLVDALMNIR AKPGWLIVVA
GHTDITGDAQ ANQILSLKRA EALRDWMLST SDVSPTCFAV QGYGATRPVA TNESAEGRAA
NRRVEISLVP QADACQVPET VNRSQEHATS LSK
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