| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0779 |
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| Symbol | |
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| ID | 5386114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 935078 |
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| End bp | 936430 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640863743 |
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| Product | hypothetical protein |
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| Protein accession | YP_001399764 |
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| Protein GI | 153949312 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG AACGTCCTCT GTGGACTCGC GGAGTTTTGA TTTCCCCGCA GCAATTTCAA
CAACAGGCTT CTTGGGAGGC CTGGACCAAT GAATGCATCG CACAAATGGG CGTCATGCAT
CCCTGGGGAG TCCTTCAGGC CACTTTTGCA TTAGATGCAT TGGCTCAGGG CCGCCTGAAA
GCAGAACGTT TGCACCTTCG TTTTCAGGAC GGTGTCTTGG TGGACACCGA TTGTGCTGAT
GTGTTGCCCC CGACACTGAC ACTGGCCGCG AATCTGCCGC CGGAGGCCAC CGAAGCCACG
GTTATGCTGG CGATGCCACA ACTGTATGCC AACGGGGGTA ACTGCCTGCA ACCCGATGAG
CGGGGCGAAC GGCCCGTGCG CCATCGTCAG GCTTGGCGCG ATGTACAAAA TCAGTATGGG
GATGATAAAA AGCAGGTCGC GGTGATGTAC CACCAACTGA CCCTGCGGTT GGACAGTCAG
GAAAACGGCG ATTATCAGGT CTGTCCGGTG GCGCGTTTGC TGCGGGATGC GCAAGGTCGC
TGGACACTGG ATCCACGTTT TATCCCGCCT ATGCTGAGCT TGCAGGCCAG TGCCTGGTGT
GGCGAACAGC TGGAATTACT GATGGTGCAG CTTCGGGCGC GTTTACAGCG TCTGATGGGC
ATGCGCCGGG AAAGCAATGC ACGAATGGCT GATTTTGCTG TCGCGGATGT GTCGTTATTC
TGGTTGCTCA ATGCCCTTAA CAGCGCTGAG CCGGTACTGG GGAATTTTCA GCGTTATCCG
CAGACCCACC CGGAACGGCT GTATCAGGAA CTGGCAAGAT TGGCGGGCAG CCTGCTGACG
TTTTCCCTTG AGCATGAAGT GACGGCGATC CCGGTTTATC AGCATGAACA GCTGACCCGC
GTCTTCCCCC CTTTATTTGC TTTGCTGAAT ATTCTGCTGG AAGCCAGCCT CCCTTCACGG
GTGGTGGCGA TTGAGCTGGA GCATGAACCG CGTATCAATC AGTGGCGAGC GACCCTGCGT
GATCCTCGCT TGCGTGAGGG GGCCGATTTC TATCTGTCGG TACGTTCCAC GCTGTCTTCA
GCGCAGTTAC AAACCCAGTT CCCGCAGTTG TGTAAAGCCG GAGCGCCGGA TGATGTCGGT
AATGTGGTGA ATGTCGCACT GAGCGGGATC CCGTTGCGTC CACTGAGCCA TGTCCCTGCC
GCCATCCCCT TGCGCCTGGA AAATCAGTAT TTCTCCCTTG ATCTCAGCCA CCCTGCTGCG
AAGCAGATGA TGGAGGCAGG GGCTTGTGTG TTCTATGTGC CTGGTACGCT GGGTGAGATC
CAACTGGAAT TGTTTGCGGT GTTGCGCGCA TGA
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| Protein sequence | MKIERPLWTR GVLISPQQFQ QQASWEAWTN ECIAQMGVMH PWGVLQATFA LDALAQGRLK
AERLHLRFQD GVLVDTDCAD VLPPTLTLAA NLPPEATEAT VMLAMPQLYA NGGNCLQPDE
RGERPVRHRQ AWRDVQNQYG DDKKQVAVMY HQLTLRLDSQ ENGDYQVCPV ARLLRDAQGR
WTLDPRFIPP MLSLQASAWC GEQLELLMVQ LRARLQRLMG MRRESNARMA DFAVADVSLF
WLLNALNSAE PVLGNFQRYP QTHPERLYQE LARLAGSLLT FSLEHEVTAI PVYQHEQLTR
VFPPLFALLN ILLEASLPSR VVAIELEHEP RINQWRATLR DPRLREGADF YLSVRSTLSS
AQLQTQFPQL CKAGAPDDVG NVVNVALSGI PLRPLSHVPA AIPLRLENQY FSLDLSHPAA
KQMMEAGACV FYVPGTLGEI QLELFAVLRA
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