Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0740 |
Symbol | |
ID | 5387959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 907446 |
End bp | 907721 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863706 |
Product | IS1 family transposase orfA |
Protein accession | YP_001399727 |
Protein GI | 153947493 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG TTGATGTGAA ATGTCCATTT TGCGAGCAGT TCCACCCTGT TAAAAAGCAC GGGCCAGGAC GCACAGGGCA TCAGCGCTAC CGCTGTCAGG CCTGCCGACG GAGCTTTCAA CTAGAGTACG AGTATCGTGC CTGCCACCCC GGTATGAAAG AGCAAATTGT CGATCTTGCT ATGAACAATG CCGGTATTCG TGATACTGCA CGGGCGTTGC ATATCAGTAT CAATGCGGTC ATGCGCACTT TAAAAAACTC TCGCCGCAGC GTGTAA
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Protein sequence | MAKVDVKCPF CEQFHPVKKH GPGRTGHQRY RCQACRRSFQ LEYEYRACHP GMKEQIVDLA MNNAGIRDTA RALHISINAV MRTLKNSRRS V
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