| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0732 |
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| Symbol | clpV1 |
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| ID | 5385493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 894308 |
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| End bp | 896956 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640863700 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001399721 |
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| Protein GI | 153947751 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.759249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATC AGTCAGCCAT ATTACTTCGC CGCTTAAATC CCTATTGCGC ACAGGCACTG
GCCGGTGCTG CAACCCTGTG TCAGACCCGC GCCCATGCCG AGATCACCAT TGAACATTGG
TTGTTGAAAC TGCTGGAGCA GGGCGAAGGC GATATCACGG TGATTGCCCG GCGTTATGAG
TGGGACATGG ACAGTCTGTG GCAGGGATTG CTGGCCCATT TGGAGACCTT ACCCCGCACC
GTGCAGGGCA AACCTCAGTT GTCAGCCGCG TTACAGCAGC TGATCAAAAG TGCCTGGTTG
GATGCGTCGT TGCAGGAAAA TGCTGAGGCG GTACGTTCCG TTCATCTATT ATCCGCCCTG
ATAAATTCGC CATCATTATT GGCCGCCGAT GCTGCCTGGC CGTTGCTCAG CCTGAGCACC
ACTCAGCTAC AGCGCCTGTT GCCGTTGCTG GACAGCCAAT CCGACGAACG TCCTGAGGTG
CAGCAGGCTG CGGCACTGGC CGACAGCCCG GTCAATCTGG CCGATGAGGC CGCGACGGTT
ACCTCCGCCA GTGGTCAGCC GCAACTGAAT GACGCGCTGC AAGCGGCGCT GGATAAATTT
ACCCTCGATG TCACCGCCAA AGCCCGTGCC AACCAGATTG ATCCGATTTT TGGCCGCGAC
AGCGAGATCC GCCAGATGAT TGATATCCTG TCGCGCCGCC GTAAAAACAA CCCGATTTTG
GTGGGTGAAC CGGGTGTGGG GAAAACCGCC TTGGTTGAAG GGCTGGCACT GCGGATTGCC
GAGGGCAACG TACCGGACAG CCTGAAAACC GTCAGTGTGC GCACACTGGA TTTGGGTCTG
TTACAGGCCG GTGCCGGGGT CAAAGGCGAG TTCGAACAGC GCCTGAAAAA TGTTATCGAG
GCGGTGCAAC AATCCCCCAG CCCGGTGCTG CTGTTTATCG ACGAAGCCCA CACCATTATC
GGGGCCGGTA ATCAGGCCGG TGGTGCCGAT GCGGCCAACC TGCTGAAACC GGCACTGGCG
CGTGGCGAAC TGCGCACCAT CGCCGCCACC ACCTGGTCCG AATACAAACA GTATTTTGAA
CGCGATGCCG CACTGGAGCG CCGCTTCCAG ATGGTCAAAG TGGACGAGCC GGATGATGAC
ACCGCCTGCC TGATGCTGCG TGGCCTGAAA GAACGTTACG CCACCCATCA CGGCGTGCAT
ATTCTGGACG CCGCTATCAC CGCAGCGGTT ACCCTGTCGC GCCGCTTCCT GACCGGCCGC
CAACTGCCGG ACAAAGCGGT GGATCTGCTC GATACCGCCG GTGCCCGGGT GCGCATGAGC
ATTGACACCT TGCCGACTGC GCTGATGGCG ATTAACGCCG AGCTGGCCGC ACTGGCGATG
GAGCAACAGG CCATCGAACA GGACCTGCTC CTGTTGCCGA ATGTCAGTTC AACGCGCTTA
CCTGAGATTG AGCAACGCCG CGCCGCGCTG GCGGTTGGGC AGCACACACT CGAACAGCAA
TATAAAAAAG AAAAACGGCT GACCACCCTG ATTATCGAGG CGCGTCAGGA TATCGCCAAC
GCGGCACATC TGGTCGCGTT GCAGGAGGAA CTCGTTCAGA TCCAAGGCAA CGCGCCGCTG
CTGTCGCTGG ACGTTGATGT GCGCACTGTT GCGGCTGTGA TCGCCGACTG GACCGGCGTG
CCGCTGAGCA GTCTGTTGAA AGACGAACAG ACCGATTTGT TGCAACTGGA AAACCATCTC
GCCACCCGCG TAGTCGGGCA GGATACGGCG CTGGGTGCGC TGGCGCAACG GCTGCGGGCG
GCGAAAACCG GGCTGACATC AGAGAATGGC CCGCTGGGGG TGTTCCTGCT GGTCGGGCCG
AGTGGGATCG GCAAAACCGA AACCGCGCTG GCACTGGCCG ACAGCCTGTT CGGTGGCGAG
AAATCGCTGA TCACCATCAA CATGTCCGAA TATCAGGAAG CACACACCGT CTCCCAATTG
AAAGGGTCGC CCCCGGGCTA TGTCGGCTAC GGTCAGGGCG GCGTATTGAC CGAAGCGGTG
CGCAAACGGC CTTACAGCGT GGTGCTGCTG GATGAAGTCG AGAAGGCCCA TCGTGATGTG
CTGAACCTGT TCTATCAGGT GTTTGACCGC GGTTTTATGC GCGACGGTGA AGGGCGCGAA
ATTGATTTCC GCAACACGGT GATGGTGATG ACCGCCAATC TGGGCAGTGA TCATCTGATG
CAGTTGCTGG ATGAGCAACC GGACGCGCCG GACAGCACCC TGCATGAACT GCTGCGGCCA
ATATTGCGCG ACCACTTCCA GCCCGCGCTG CTGGCCCGCT TCCAGACGCT GATCTACCGC
CCACTGAATG CCCCCGCGCT GCGCACCATC GTCGAAATGA AACTGGCACA GGTCGCTAAC
CGCCTCAAAA AACATTACGG CTTGCACTGC ACTTTTGAAG CAAGCCTGTA CGACACACTG
GTCGCCGCCT GCCTGCTGCC GGACACCGGC GCACGCAACA TCGACAGCCT GCTCAATCAG
CAGATTTTAC CGGTATTGAG CCAGCAGCTG TTAAGCCGCA TGAGCGAGCA ACAGCGCACC
ACCTCGCTGA CGCTGGGCTG GGATGAAGCC GACGGCATTA CCCTTGAATT TGAAGGAGGC
GAAAAATGA
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| Protein sequence | MEHQSAILLR RLNPYCAQAL AGAATLCQTR AHAEITIEHW LLKLLEQGEG DITVIARRYE
WDMDSLWQGL LAHLETLPRT VQGKPQLSAA LQQLIKSAWL DASLQENAEA VRSVHLLSAL
INSPSLLAAD AAWPLLSLST TQLQRLLPLL DSQSDERPEV QQAAALADSP VNLADEAATV
TSASGQPQLN DALQAALDKF TLDVTAKARA NQIDPIFGRD SEIRQMIDIL SRRRKNNPIL
VGEPGVGKTA LVEGLALRIA EGNVPDSLKT VSVRTLDLGL LQAGAGVKGE FEQRLKNVIE
AVQQSPSPVL LFIDEAHTII GAGNQAGGAD AANLLKPALA RGELRTIAAT TWSEYKQYFE
RDAALERRFQ MVKVDEPDDD TACLMLRGLK ERYATHHGVH ILDAAITAAV TLSRRFLTGR
QLPDKAVDLL DTAGARVRMS IDTLPTALMA INAELAALAM EQQAIEQDLL LLPNVSSTRL
PEIEQRRAAL AVGQHTLEQQ YKKEKRLTTL IIEARQDIAN AAHLVALQEE LVQIQGNAPL
LSLDVDVRTV AAVIADWTGV PLSSLLKDEQ TDLLQLENHL ATRVVGQDTA LGALAQRLRA
AKTGLTSENG PLGVFLLVGP SGIGKTETAL ALADSLFGGE KSLITINMSE YQEAHTVSQL
KGSPPGYVGY GQGGVLTEAV RKRPYSVVLL DEVEKAHRDV LNLFYQVFDR GFMRDGEGRE
IDFRNTVMVM TANLGSDHLM QLLDEQPDAP DSTLHELLRP ILRDHFQPAL LARFQTLIYR
PLNAPALRTI VEMKLAQVAN RLKKHYGLHC TFEASLYDTL VAACLLPDTG ARNIDSLLNQ
QILPVLSQQL LSRMSEQQRT TSLTLGWDEA DGITLEFEGG EK
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