Gene YpsIP31758_0731 details

Gene Information

• Locus tag: YpsIP31758_0731
• ID: 5385710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 893523
• End bp: 894014
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640863699
• Product: hypothetical protein
• Protein accession: YP_001399720
• Protein GI: 153950470
• COG category: [S] Function unknown
• COG ID: [COG3157] Hemolysin-coregulated protein (uncharacterized)
• TIGRFAM ID: [TIGR03344] type VI secretion system effector, Hcp1 family

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTC CAGTTTATCT GTGGCTGAAA GACGACGGCG GTGCGGACAT CAAGGGTTCT 
GTTGATGTAC AAAGCCGTGA AGGCAGCATT GAGATCGTGG CACAGGATCA TAACCTGTAC 
ATCCCAACCG ATAACAACAC CGGCAAACTG ACCGGTACCC GTATCCACAC CCCGTTCGTT 
TTCACCAAAG AAATCGATGC GTCGACCCCG TACCTGTACA AAGCGGTGAC CACCGGTCAG 
ACACTGAAAA CCGCCGAGTT CAAATGGTAC CGCATTGATG ACGCTGGCCA GGAAGTTGAA 
TATTTCAACA CCAAACTGGA AAACGTCAAA GTGGTCAAAG TTGCGCCGAA AATGCACGAC 
GTGAAAGATC CGGCGAAAGA GAAGCACAAC CACCTGGAAC TGGTGGAACT GCGCTACGAA 
AAAATCACCT GGACCTTTAA AGACGGCAAC ATCATTCATT CCGATTCGTG GAACGAGCGC 
GCCACCGCGT AG 

 

Protein sequence

MAIPVYLWLK DDGGADIKGS VDVQSREGSI EIVAQDHNLY IPTDNNTGKL TGTRIHTPFV 
FTKEIDASTP YLYKAVTTGQ TLKTAEFKWY RIDDAGQEVE YFNTKLENVK VVKVAPKMHD 
VKDPAKEKHN HLELVELRYE KITWTFKDGN IIHSDSWNER ATA