Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0730 |
Symbol | |
ID | 5384387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 891783 |
End bp | 893519 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640863698 |
Product | OmpA domain-containing protein |
Protein accession | YP_001399719 |
Protein GI | 153946939 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGGT GGTGGCAACG TGGGTTGTGG CTCTGGGCGG GTTTGCTGGC GGTCATCTTG TGTCTGGCAT TTCTGCCGCT CTCCCCGTGG GGGCGCTGGC TGATGCTGGC ATGGGTGGTG CTGATTTGCA TGTTGGGCGG GTCGCGGGCA GGGCGGCAAG CGGCCGGTGC ATCCTCTGAT CCGCTGTTCG CCGGGTTGGC AACTGAAAAC GGTCTTCTGC CTGAAAACAG TCGCTTACCG GTGGTGTTGG TGTGTGGTGA TGGTCTGGCG TCATGGTTTG GTCGCGAACG GTCACACCAG AGTGCACAGG GCTGCTGGCT GCGGGTGGAT GATATCAGCA CCCTGCGGCA GTTTGCCCGA CAACTGCTGT GGCAACGGCC GGAATGGGCC GCTCAGTTGG CGGTGATGAT GGTCGTGAAC CCGCAGCAAC GCCGCGATGA GCGCCTGCTG GCCGCCGATC TGCAAGAGCT GCGCTGGCAA CTGATGCAAC TGCGCCGCGA TAGCCGCCAT CCTGTTCCCT TGCTCCTGAG CAGCACGGTG GCCACCTCGG TTGCCCGTGA TACGGTCTGG CTGTCACAGC AGCAGACACC GCCGCTGACA CTCTGGTCAA CCGTCTCGAC GCCGGGCTCT CTGGCCGACT GGCAGCGTGC GGAAAGCCGT GCCGTACAGG CTGAACGACT GAAACAGGCG GTGCTGTTCA GCAGCCAGCA TGACTGGCTG AACGCACAGG TGCTGCCGGT ATTGCAGGCA CCCAATGCGG ATGTTGACCC CCTTGCCCCG CAACAGATTA TTCAACAGCA GGTTGCCAGT CTGGCCGATC CGGTGCCTGC CTCGCTGTGG CAGCACTGGC TGGCGGCGCA TACCACGCTG ACACAGGTGG CGGGTTGGCA TCCACCGCCG CCCGCCGCCC ATGACGCCTT ACCGCTGCCG GATTTTGTCT TTTCAGCGCT TCCTCTTGGT AGCGGGGTGT CGTCACGCCG TCGGGTACTG CGCCATGGTG TCACCTTACT GACGTTGGCG GCGATGGTGG CGTTGTGCAG CAGCGCCTGG CAGAACCGGC AACTGTTGCA CCGGGTGGCC TTTGATATCC GTCAGTACCA CAGCGTGGCG ATGACGGATT ATTCCCCGAA AGCGCAGGCG GTGGCGGTAT TACGCCGTGA TGCGGGGCTG CTTGATGAAG GGTACCGCAA CGGTGAACCG CTGCGTCTGG GCCTGGGGTT ATATCGGGGG GAGCGGCTGC GCCCGCCGCT GTTGGCGGCG ATCAAAAGCT ACATCCCGCC CCCTCCGCCC CCTCCCGCGC CACCGGCGCC GAAAACCGTG CGCCTCGACA GCCTGTCACT GTTCGATGTG GGTAAATTCA CGCTGAATGC GGGGTCCACC AAAATGCTGG TCACGGCGCT GATCGACATC AAAGCCAAAC CCGGCTGGCT GATCGTGGTG GCCGGGCATA CCGACATCAC CGGCGATGCG CAGGCCAACC ACATTCTGTC GCTTAAGCGC GCCGAAGCAT TACGCGACTG GATGCTGTCA ACCAGCGACG TCTCGCCGAC CTGCTTTGCG GTGCAAGGTT ACGGGGCCAC ACGCCCTATC GCCGACAACG ATACTCCCGA CGGTCGGGCG CTCAACCGCC GGGTCGAAAT CAGTCTGGTA CCACAGGCTG ATGCCTGTCA GGTGCCGGAT GTAAAAACAG CGTCACAGGA TGAAAGTGAC GTATCAACGC AAGAAATGGA GAAGTAA
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Protein sequence | MSRWWQRGLW LWAGLLAVIL CLAFLPLSPW GRWLMLAWVV LICMLGGSRA GRQAAGASSD PLFAGLATEN GLLPENSRLP VVLVCGDGLA SWFGRERSHQ SAQGCWLRVD DISTLRQFAR QLLWQRPEWA AQLAVMMVVN PQQRRDERLL AADLQELRWQ LMQLRRDSRH PVPLLLSSTV ATSVARDTVW LSQQQTPPLT LWSTVSTPGS LADWQRAESR AVQAERLKQA VLFSSQHDWL NAQVLPVLQA PNADVDPLAP QQIIQQQVAS LADPVPASLW QHWLAAHTTL TQVAGWHPPP PAAHDALPLP DFVFSALPLG SGVSSRRRVL RHGVTLLTLA AMVALCSSAW QNRQLLHRVA FDIRQYHSVA MTDYSPKAQA VAVLRRDAGL LDEGYRNGEP LRLGLGLYRG ERLRPPLLAA IKSYIPPPPP PPAPPAPKTV RLDSLSLFDV GKFTLNAGST KMLVTALIDI KAKPGWLIVV AGHTDITGDA QANHILSLKR AEALRDWMLS TSDVSPTCFA VQGYGATRPI ADNDTPDGRA LNRRVEISLV PQADACQVPD VKTASQDESD VSTQEMEK
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