Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0728 |
Symbol | |
ID | 5385810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 889748 |
End bp | 891100 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640863696 |
Product | hypothetical protein |
Protein accession | YP_001399717 |
Protein GI | 153950460 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG AACGCCCTCT GTGGGCTCGC GGGATCCTGG TGTCTCCGCA ACAATTTCAA CAACAGGCTT CCTGGGAGGC CTGGACCAAT GAATGCATTG CGCAAATGGC CGTGATGCAT CCCTGGGGCG TGCTTCAGGC TGTTTTCGAG CCGGATGCGC TGGCACAGGG CCGCCTGAAA GCGGCGCGTC TGCATGTGCG TTTTCCGGAC GGTGTGCTGG TGGATACCGA GTGTGCTGAT GTGCTGCCGC CCACGCTGAC GCTGGCAGCC AGTCTGCCCG CCGAGGCCAG CGACGCCACG GTGATGCTGG CGATACCACA ACTGTATGCC AATGGCGGTA ACTGCCTGCA GCCGGATGAG CGGGGCGAAC GCCCGGTACG CCATCGTCAG GCCTGGCGCG ATGTCCAAAA TCAGTTCGGC GATGACAAAA AGCAGGTCGC GGTGATGCAC CACCAACTGA CCCTGCGGCT GGACACTCAG GAAAACGGCG ATTATCAGGT CTGCCCGGTG GCGCGCTTGC TGCGGGATGC GCAAGGTCGC TGGACACTGG ATCCGGGCTT TATTCCGCCG ATGCTGAGCC TGCAGGCCAG TGCCTGGTGT GGCGAACAGC TTGAGTTATT GATGGTGCAA CTGCGGGCGC GTTTGCAGCG TCTGATGGGG ATGCGCCGGG AGAGCAATGC ACGGATGGCC GATTTTGCTG TTGCGGATGT GTCGCTGTTC TGGCTGCTCA ATGCCCTTAA CAGTGCCGAA CCGGTATTGG GGAATTTTCA GCGCTATCCG CAGATCCACC CGGAACGGCT GTATCAGGAA CTGGCCAGGC TGGCGGGCAG CCTGCTGACG TTCTCCCTTG AGCACGAAGT GACGGCGATC CCGGTTTATC AGCATGAACA ACTGACCCGC GTCTTTCCCC CGTTGTTTGC CCTGCTGAAT ATTCTGCTGG AAGCCAGCCT CCCTTCACGG GTAGTGGCGA TTGAGCTGGT TCATGAACCG CGTATCAATC AGTGGCGCGC GACCCTGCGT GACCCTCGTC TGCGCGAAGG GGCCGATTTC TACCTGTCGG TCCGTTCCTC GTTGCCCGCG GCCCAATTGC AGACTCAGTT CCCGCAGTTG TGTAAAGCCG GTGCGCCAGA TGAGGTCGGT AACGTGGTGA ATGTTGCGCT GAGTGGCATC CCACTGCGTC CACTCAGCCA TGTCCCTGCC GCCATCCCCT TGCGGCTGGA AAACCAGTAC TTCTCCCTTG ATCTCAGCCA CCCTGCGGCG ACGCAGATGA TGGAGACGGG GGCCTGTGTG TTCTATGTAC CCGGTACGCT GGGTGAGATC CAACTGGAGC TGTTTGCGGT GCTACGCGCA TGA
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Protein sequence | MKIERPLWAR GILVSPQQFQ QQASWEAWTN ECIAQMAVMH PWGVLQAVFE PDALAQGRLK AARLHVRFPD GVLVDTECAD VLPPTLTLAA SLPAEASDAT VMLAIPQLYA NGGNCLQPDE RGERPVRHRQ AWRDVQNQFG DDKKQVAVMH HQLTLRLDTQ ENGDYQVCPV ARLLRDAQGR WTLDPGFIPP MLSLQASAWC GEQLELLMVQ LRARLQRLMG MRRESNARMA DFAVADVSLF WLLNALNSAE PVLGNFQRYP QIHPERLYQE LARLAGSLLT FSLEHEVTAI PVYQHEQLTR VFPPLFALLN ILLEASLPSR VVAIELVHEP RINQWRATLR DPRLREGADF YLSVRSSLPA AQLQTQFPQL CKAGAPDEVG NVVNVALSGI PLRPLSHVPA AIPLRLENQY FSLDLSHPAA TQMMETGACV FYVPGTLGEI QLELFAVLRA
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