Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0724 |
Symbol | |
ID | 5386886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 885448 |
End bp | 885711 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863692 |
Product | IS1, transposase orfA |
Protein accession | YP_001399713 |
Protein GI | 153950170 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGCA TTAATGTTCA TTGTCCCCGT TGTGATTCTG CTTTGGTTTG TCGACATGGT CAGAACCCTA AGGGCCAAAG CCGTTTCCGC TGCCGTGAGT GCCGCTCTGT ATTCCAACTG ACCTACACTT ATCAGGCCAG AAAGCCCGGA GTTAAAGGGC AGATCGTTGA TATGGCCTTT AACGGCGCAG GTGTGTGGGA TATGGCAAGA ACGCTAAAAA TCGGTATCAA TACCGTTATC CGCACTTTAA AAAACTCTTG CTGA
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Protein sequence | MACINVHCPR CDSALVCRHG QNPKGQSRFR CRECRSVFQL TYTYQARKPG VKGQIVDMAF NGAGVWDMAR TLKIGINTVI RTLKNSC
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