Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0715 |
Symbol | |
ID | 5385111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 876682 |
End bp | 877905 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640863683 |
Product | major facilitator transporter |
Protein accession | YP_001399704 |
Protein GI | 153950332 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATAT CCTCAGAGTC TGACGCTCGC TCAAGCGGGC TTACATCGTC TACCCATTGG CCTTTAGCGT TCTGCGTTGG GTTACTGGGC ATCGGGCAAA ACGGTTTATT AGTGGTGTTA CCGGTATTGG TAAGCCGCAC TCATCTGTCA TTGTCGGTGT GGGCGGGTCT ATTGACACTT GGCTCAATGC TATTTTTAGT GGGATCGGCA TGGTGGGGCC GGCAATCGGA GATCCGTGGC TGCAAATTTG TTGTCATCAT GGCACTGGCA GGTTACTTGC TTAGCTTTGT TTTATTGGCG CTGGCGGTGT GGGGGTTGTC AGCAGGGTGG TTATCGGAAA TGGCCGGTCT GGGCTGGCTA ATCGTGGCTC GTATTATTTA TGGCCTGACC GTCTCTGGTA TGGTGCCCGC TAGCCAGACC TGGGCACTAC AGCGTGCCGG TTATGAGCAA CGGATGGCGG CGCTGGCGAC CATCAGTTCG GGGCTGAGCT GTGGCCGTCT GCTCGGCCCA TTGTGTGCCG CCCTCGCGCT CTCAATACAC CCGATAGCCC CCCTGTGGCT GATGGCAATT ACACCACTGA TCGCACTGCT GGTGGTGTAT CGCCAATACA ATGACCCGCC GTTACCCCCA GTGGTGCATC AACAAAATCG TTTACGCCTC AATATGTTGC CTTATTTACT GTGCGCGTTG TTGCTGGCAG CAACTGTCAG CCTGATGCAA CTTGGCCTGG CACCTCACCT AAGTCAATTG TTTAGCCATT CGGCCACCAC GGTGAGCCAC CACGTGGCCA TTTTGCTTAG CATAGCCGCG GGTTGTACGT TGCTGGCACA GTTTCTGGTG GTTCGCCCAC AACGTTTTAC GCCACCTCAG TTGCTGCTAG TGGCAGCCTT GCTCATGGTG CTTGGCTTGG GGCTGATGTG TGTTCAACCG CTGGTACTAT TCTATCTAGG TTGTGCGCTG GCTTCTTTCG GCGCCGCGAT GGCGACACCG GGTTACCAAC TGATGTTGAA TGACCGGTTA TCTACTGGCA AAGGCTCCGG CGTGATCGCT ACCAGCCATA CATTGGGCTA TGGCATGAGT GCATTGATGG TGCCGGTAGT CGCAAAATTT TATGGTGAGT CACAGTTGGT AGCCGCGGCG TTCATGATGG CCATTTTGTT GGGGGGGATC AGTGGCTGGC TGTGGTGCCA GCATCGAACA ACCGCCCATT CTGTGGGAGA GTAA
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Protein sequence | MRISSESDAR SSGLTSSTHW PLAFCVGLLG IGQNGLLVVL PVLVSRTHLS LSVWAGLLTL GSMLFLVGSA WWGRQSEIRG CKFVVIMALA GYLLSFVLLA LAVWGLSAGW LSEMAGLGWL IVARIIYGLT VSGMVPASQT WALQRAGYEQ RMAALATISS GLSCGRLLGP LCAALALSIH PIAPLWLMAI TPLIALLVVY RQYNDPPLPP VVHQQNRLRL NMLPYLLCAL LLAATVSLMQ LGLAPHLSQL FSHSATTVSH HVAILLSIAA GCTLLAQFLV VRPQRFTPPQ LLLVAALLMV LGLGLMCVQP LVLFYLGCAL ASFGAAMATP GYQLMLNDRL STGKGSGVIA TSHTLGYGMS ALMVPVVAKF YGESQLVAAA FMMAILLGGI SGWLWCQHRT TAHSVGE
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