| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0694 |
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| Symbol | |
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| ID | 5384783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 840677 |
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| End bp | 844456 |
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| Gene Length | 3780 bp |
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| Protein Length | 1259 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640863663 |
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| Product | putative autotransporter protein |
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| Protein accession | YP_001399684 |
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| Protein GI | 153950822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAC AATTTAGAGA GCCTATTTCT ACCTCACCCG CTCAACCGGA TGCAGGGCAC
CGACACCTCT TCAGTTGTGC TCCTGCAGCC GCGATTAATC CCATCACATT GGCGATTATT
GTTGCGTTCT CCGCCCTCGT CTTGCCACAA ACCGCACGGG CGTCGTGTAA TAGCTCGGGG
GTGGGCACCT ATGTTTGCGA AGGTGAAAAT CATGCTGGGA TCATCTTAAG CGGCACCGAT
ATTGCCGTTG AGACCCAGCC CGGTTTTAGC ATCACAGAGC CCGGAGGTGC GGATCCTGCG
CTCTCGTTAA TTGGTTCTGG TGTCATCAGC TACCTTGATA CCAACAGGTC TGCGCTTGAT
ACCACCGGTG CCGATTCTTT GTATATCCAG AATGATACCT CGATGGCTGG GCAATCGACG
TCCATTAATA TTCAGTCCAA CAGTTCGATT GGTAGCGGTA TCAACATTAA CAACCGCAGT
GGCGCTGATG CGGCTATACA GATAGATCTC TCCGGCACGT TATCCGGTAA CCAAAATGGC
TCTGCGGCCC TCTCAATCCA TTCATCGGCT GAGGGTAATT CTGCGTTCAT ATTGAATCTC
GATGCTCTGT CTGGTTCTAT GGGTCTGCAG AGCTACAATG ATTCACGCAG TGGAATAGCC
ACCACTAATA TCAATATTGT CAACGATATT AACGTCGAAT ATTCGGGTGC CTCTATTAAC
AACACCGGCA ATGGCGAGAC CAGCATAATT AATTTCAACT CAAAAAATAT CACGACAGAA
TTCGATGGCT TGAATGTTTA TAATACGAAT TATGCTGGGG CGGCGATTAC CAATATCAAT
ATTGATGGCG ATATCCGTTC AGCCAATAGC CAAGCTGCCA CTTTTTATAA TAGTGCTTAT
GAGGGTCCTT CAAGCCTTAG GCTTCGGGCG AACCATGTCA CGGGTGAATA TGCTGGCCTT
TATATCAGCA ATGATAGCCG TAAGAGCTCA GCGATAACCG ATATCCTGTT GACGGGGGAT
CTGACGTCTA CTTCAGGGGC GGGTCTCGTG TTCAATTCCT ATGTGGAAGA GGACGACATC
GGGGCATCTA TCAAGTTAAA TAATATCTAT TCTTACTACG AAGCGCTCAG TTTAAGTGCA
AATACCTTAA ATGGCGACAT GCAGTTTGAC CTTGATATTT CAGGCGATAT TGTTAACGAA
TATGGTACCG GAATTTTAAT GATGGGGATG GCTTCTGAAG GTAACTCCAC CATAATCATC
AATGCGAATA ATATTAATTC CGGCAGCCAA TCGCTCAAAG TTAACAACTA TAGCCATTTA
GGAACCGCCG TTTCTGACAT TACCGCAACC GGGCATCTCG TCTCTGAACA GGGGGTAGGG
GCAATATTCA GTACCTATGT CAGTCAGGGG GATGCTATCG CTGTCATTAA TTTAAATGAC
ATCACTGCTG CGGGCAGTAG TGTAGAAATA GACACCATAG CGAGTGAGGG GAATTCAACC
ACCTATCTCA CCGTGGTGGG CCAGATTAAC GCCAGTAACG GAGAGGGTAT TACCCTTATT
TCGCAAGCCA CTGATGGCAG CACCCTGGTC AACATTGACG TCAATAATAT CGCCAGTGAA
TACGATGCTA TTTACCTCCA TAACTCTGTT ACTGGCGCAG ACAACGGCAC CTCGACCATT
GATTTGATCA CCCGGGGTGC GCTGGTTTCA CAGCAGGGCT ACGGGATTAA TATCGAAACC
AATACCGCAG ACACCTATGT CACCGTGGGC GGCTTGGTGC ACGGCGGCAA CGGTACCGCA
ATTGGCATTC ATCGGCTCGA AAATGTTCAA AAATCAGCCA CGTTAGAGCT GCAATCTGGC
TATGCCCTTG AAGGCGTTAC ACAGGCACTG GTCTTCACTG GCAGTTATGC GGAGATCAAT
GATGCCGCGT TGGATCTGGC AAACAGCCAT CTGGTGCTGG GGGGAGCAGG GGACGCTGCT
TTCGATCTCA CGCGTATTGA TAACCGTGAA GAGGCCATTC TGGATGGCGA CCCGAACCGG
ATCACCGGCT TCGGTACCCT GACCAAAACC AACAACAGTA TCTGGACGTT AACCGGCTCC
AATATGGCTG ACGGTGACGC CAATGCCTTC CTGTCGGCCA ATATCGCCGG GGGGATTTTG
GTGCTGGATA ACGCCACGCT GGGCCTGACA CCTGACGCCG GGGCACTGAC TGGCCCCACA
GTAAACCGCC TCAGTGCGGC CGATATCGCC GCTGACCCGA CGTTGGTGGC TACCGAAACC
GGTGCATTAA CCCTGGGTGA AGGCGGCGCG CTGTCCTCGC TCGGTGATTC GGTTCTGAGC
GGTAACCTCA TCAGCGCTGG CGGGATCCTG CTGTCAAACC ACTATACCGG CGGCAATGGT
ACCGCTACCG ATGATCGGCT GACCGTGACC GGGACTTATT TGGGTGAAAA TAACGGTTCC
GGTGAAGGGG CCTGGCTAAC GCTGGATACG GTGCTGGGGG ATGACGATTC TGCCACCGAC
CGGTTAGTGA TCAACGGCGA TGCCACCGGC ACCACCTCGG TCCGGGTGAA CAATGCGGGC
GGTCTGGGCG ATAAAACCCT CAATGGCATC AACCTGATCA CCGTGGACGG TCTGGCGCAG
GATGACACCT TCCTGCTGGC CGGGGATTAT GTCACCACGG ATGGCTATCA GGCGGTGGTG
GGCGGGGCGT ATGCCTACAC CTTACAGGCC GACGGGGAAG CCGCCACTGC GGGGCGCAAC
TGGTATCTCT CGTCAGAGCT GATGCTAACC GAGGGCGTGC GCTATCAGGT GGGCGTGCCG
CTGTATGAAC AATATCCGCA GGTGCTGGCC GCCCTGAACA CCCTGCCGAC GCTGCAACAG
CGTGTCGGTA ACCGTTACGG GGCACCGGGC GCACTGGCAG ACCTGAATTT TGACGATAAT
CAATGGGCCT GGGGCCGTAT TGAAGGGAGC CACCAGGTCA CCGACCCGGC CCGCTCCACC
AGCGGTTCAC AACGTGAGAT TGATGTGTGG AAGTTGCAGA CCGGCATTGA TGTGCCGTTG
TATCAGAGCC AGGACGGTTC ACTGCTGACC GGCGGGGTGA ACTTCTCCTA TGGTAAAGCC
AAAGCGGATA TCCACTCATT CTTTGGTGAT GGCCGCATCA ACAGCGCAGG TTACGGTCTT
GGCACCAGCC TGACCTGGTA TGGCAATAAC GGCGTGTATG TGGATGGCCA GTTGCAGACG
ATGTGGTTTG ACAGCGACCT GAGCTCCCGT ACCGCAGGGC ATGCGGTGGC CAGCGGTAAC
AATGGTCGCG GGTATACCTC AGCGATAGAA GCCGGTAAAG GTTACGCACT GGGTAACGGG
TTATCGCTGA CTCCGCAGAT GCAGGTGACC TACTCGCGGG TCGATTTCGA TACCTTCCGC
GATCCGTTTG ATAGCGAAGT CTCGCTGCAA GAGGGTGACA GCCTGCGGGG CCGCCTCGGT
GTCTCACTGG ATAAGGAAAC GACCTGGAGT GCGAAAGACG GCACCACCCG CCGCTCACAC
ATTTACAGTC ATTTCGATCT GCACAATGAG TTCCTCAACG GCAGTAAAGT GCAGGTCTCG
GGTGTGGAGT TCGCCACCCG GGATGAGCGT CAGTCGGTGG GGTTAGGCGC GGGCGGCACC
TACGAATGGC AGAATGGTCG CTACGCGGTT TACGGCAATG TCAATCTGCT GGGGGCTACA
CGGAATGTCA GTGACAATTA TGCCGTCGGC GGCACGATAG GTGCACGGGT GAGCTGGTAA
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| Protein sequence | MYIQFREPIS TSPAQPDAGH RHLFSCAPAA AINPITLAII VAFSALVLPQ TARASCNSSG
VGTYVCEGEN HAGIILSGTD IAVETQPGFS ITEPGGADPA LSLIGSGVIS YLDTNRSALD
TTGADSLYIQ NDTSMAGQST SINIQSNSSI GSGININNRS GADAAIQIDL SGTLSGNQNG
SAALSIHSSA EGNSAFILNL DALSGSMGLQ SYNDSRSGIA TTNINIVNDI NVEYSGASIN
NTGNGETSII NFNSKNITTE FDGLNVYNTN YAGAAITNIN IDGDIRSANS QAATFYNSAY
EGPSSLRLRA NHVTGEYAGL YISNDSRKSS AITDILLTGD LTSTSGAGLV FNSYVEEDDI
GASIKLNNIY SYYEALSLSA NTLNGDMQFD LDISGDIVNE YGTGILMMGM ASEGNSTIII
NANNINSGSQ SLKVNNYSHL GTAVSDITAT GHLVSEQGVG AIFSTYVSQG DAIAVINLND
ITAAGSSVEI DTIASEGNST TYLTVVGQIN ASNGEGITLI SQATDGSTLV NIDVNNIASE
YDAIYLHNSV TGADNGTSTI DLITRGALVS QQGYGINIET NTADTYVTVG GLVHGGNGTA
IGIHRLENVQ KSATLELQSG YALEGVTQAL VFTGSYAEIN DAALDLANSH LVLGGAGDAA
FDLTRIDNRE EAILDGDPNR ITGFGTLTKT NNSIWTLTGS NMADGDANAF LSANIAGGIL
VLDNATLGLT PDAGALTGPT VNRLSAADIA ADPTLVATET GALTLGEGGA LSSLGDSVLS
GNLISAGGIL LSNHYTGGNG TATDDRLTVT GTYLGENNGS GEGAWLTLDT VLGDDDSATD
RLVINGDATG TTSVRVNNAG GLGDKTLNGI NLITVDGLAQ DDTFLLAGDY VTTDGYQAVV
GGAYAYTLQA DGEAATAGRN WYLSSELMLT EGVRYQVGVP LYEQYPQVLA ALNTLPTLQQ
RVGNRYGAPG ALADLNFDDN QWAWGRIEGS HQVTDPARST SGSQREIDVW KLQTGIDVPL
YQSQDGSLLT GGVNFSYGKA KADIHSFFGD GRINSAGYGL GTSLTWYGNN GVYVDGQLQT
MWFDSDLSSR TAGHAVASGN NGRGYTSAIE AGKGYALGNG LSLTPQMQVT YSRVDFDTFR
DPFDSEVSLQ EGDSLRGRLG VSLDKETTWS AKDGTTRRSH IYSHFDLHNE FLNGSKVQVS
GVEFATRDER QSVGLGAGGT YEWQNGRYAV YGNVNLLGAT RNVSDNYAVG GTIGARVSW
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