Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0681 |
Symbol | |
ID | 5388194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 807480 |
End bp | 809552 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640863651 |
Product | TonB-dependent receptor |
Protein accession | YP_001399672 |
Protein GI | 153949466 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGATAT TTTATCGGAA GTTTTTTACT GTGACGGTTT TAATTTCATT ACCCTGCCTG GTATGGTCAC AAAGTCATAA TAACAGTAAG GATGAATTAG ACACTATTAC CGTAGTTGCA CAAAAAATTA ATCAACAGCA GCAAAAAACA CCCATAAGTA TAAGTGTATT AACGGGCTTT GATTTAGAAA GAGAAAATAT AGAGAACATA TACGAATCGA TAATGCGCAT CCCTAATGTC TATATGGTAA AAGCGGGCAA CCCATCTGAC GCAGGTTTTT TTACCATGCG AGGGACGACC CCCGGAATGG AAGGGATTCA ATCAGTAGGT TTCTTTATTG ATGGTGTTTA TGCTAATACT TTTGATACGG AATTATTAGA TGTTGATAGA ATAGAAGTAT TAAGAGGCCC TCAAGCGACG CTATATGGCC GTAATACGGA ATCTGGAGTA ATCAATGTCA TTACTAAAAA TCCTGAATTT TCACCTGAGT ATAAAATAGG TCTATCTTAT GGAAATTATA ATCGCACGCA GGTAACCACG GTTTTAGGTG GAAGTATTAA TGATAGTGAA CAGTTTTCTT ATCGTGCAGC ATTGAAATAC CTTTATGGGA ATGGCTACTT TAAGCGTGAT TATGACGGTA AAAACAATGT AGATAATCTC AATGATTTTA GTGGTCGGTT TAAACTACGT TGGCAACCTA TGGATGATGG TTGGGATGTG ATTACAACCT TTGATATCCA AAATAGGCGT AACGGAAACA CGTCTTTTAC CGCATTAGAT AAAATAAAGT CGGGTCAAAA ATATGTTGAC TCAAATTATA TTGGCAAATC TGATGTTGAT GCTTATAAAG GTCAAATAAA TGCAGTTTAT ACCTTTGATG ATATTGATTT CACCTCGGTT AGTGCTTATG TAGACGAAAG AAAAGTTGAT AATCAAGACC TCGATTTTAC GCGATTATCA ATTAGTGAAC TATTGATGAA TCGAAAAACA AAACAATTTT CACAAGAGTT TCGTTTGAAC TCTAAATACA GCGGGCCATT TAATTGGTTG ATAGGGAGCT ATTATTTTTA TCAAGATGAT GAAAATGAAA TTGATTTCCG CTATCTGCCC TATAACTTAG CACAACTCCG GAAATCCAAT ATCAAGACCA ATAACTACGC AGTGTTTGGT AATGTTAATT ATTACCTACT GAATGATGTT GAGCTTGTGG CGGGTGCAAG GTATGACTAT GAGAAAAAGA AACTTAACTT TTTGATGGAT AATGGGTTTA ACCCATATCA GCCGTATTCT CATGATAATA ATAGTAATTC ATTTGGGGCT TTTTTGCCTA AGGTAGGGTT GAATTATTAT ATTACTGGCG ACGCCATGCT ATATACCAGC ATAGCACGGG GGTATAAAAG TGGCGGGTTT AACACGTTAG GGCCTCAATC TAGTCGCGCT TATAATGCAG AATATATGAC GACTTATGAG GCCGGTGTTA AAACCGAATG GTTTGATAGA ACGGTTCGTT GGAATACGTC TCTATTCTGG AATGATATGA AAGATCAGCA AGTCGAAGTG GCGTATTATC CTATTTCTTA TTCGGTTAAC AGCGGTAAGT CATTAAGCCG TGGGTTGGAG TCTGAATTTG AGTGGCGCAT TACGCGTGGC CTGACTGTAT TCGCAAATGT AGGCTATACT GATGCATATT TTAAGAACTT CCCAACAGAA ATTAAAGTAG ATAATAACTA TATTCCTGTT AACTATAAAG GTAATCGACC GGCTAATTCG CCAAGGTACA CTTATAGTAT TGGTGCTGAT TATAATTTCC TTAATGGTTA TTTTGTTAAT GCCACTTATA ATGTTAAAGG AAGTACCTAT CTTGATAATG CGAATAGTAA AAAACAACCG GCTTATGGGC TATTAGATCT TACTGCGGGT TATGAAAATA AAGATTATGG TGTCAATGTT TGGATAAAGA ATATTCTTGA TGAAACTTAT GTGACTCGTG CTTTCAAAAT GGATGATGGG ATATGGTATG GGCGCGCGGG TGAACCTATT AACTTTGGGG TTAATTTCAA TGTTAAATTT TAA
|
Protein sequence | MMIFYRKFFT VTVLISLPCL VWSQSHNNSK DELDTITVVA QKINQQQQKT PISISVLTGF DLERENIENI YESIMRIPNV YMVKAGNPSD AGFFTMRGTT PGMEGIQSVG FFIDGVYANT FDTELLDVDR IEVLRGPQAT LYGRNTESGV INVITKNPEF SPEYKIGLSY GNYNRTQVTT VLGGSINDSE QFSYRAALKY LYGNGYFKRD YDGKNNVDNL NDFSGRFKLR WQPMDDGWDV ITTFDIQNRR NGNTSFTALD KIKSGQKYVD SNYIGKSDVD AYKGQINAVY TFDDIDFTSV SAYVDERKVD NQDLDFTRLS ISELLMNRKT KQFSQEFRLN SKYSGPFNWL IGSYYFYQDD ENEIDFRYLP YNLAQLRKSN IKTNNYAVFG NVNYYLLNDV ELVAGARYDY EKKKLNFLMD NGFNPYQPYS HDNNSNSFGA FLPKVGLNYY ITGDAMLYTS IARGYKSGGF NTLGPQSSRA YNAEYMTTYE AGVKTEWFDR TVRWNTSLFW NDMKDQQVEV AYYPISYSVN SGKSLSRGLE SEFEWRITRG LTVFANVGYT DAYFKNFPTE IKVDNNYIPV NYKGNRPANS PRYTYSIGAD YNFLNGYFVN ATYNVKGSTY LDNANSKKQP AYGLLDLTAG YENKDYGVNV WIKNILDETY VTRAFKMDDG IWYGRAGEPI NFGVNFNVKF
|
| |