Gene YpsIP31758_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0676 
SymbolyopM 
ID5386024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp800106 
End bp800960 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content46% 
IMG OID640863647 
Productouter membrane protein YopM 
Protein accessionYP_001399668 
Protein GI153948203 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT CAAATATAAC CTCGCACATG TCAATGTCGA ACATAGGACC AGACCGTGAA 
ATCCATTCTG ACCGGGCAGC AGCAACAGCC TTAACTTCGG CTGACTATCA TGCAATATGG
GAAAAGTGGG CAAGCGAGGC GATAACGGGT GCTGATGAAC AGCGGGGCCT GGCAGTGGCG
AGAATGAAAG AGTGCCTGGA AAACAGTGCC GATAACCTCG AACTCTATGG GCTTGATTTG
ACCTCATTAC CAGACATTCT GCCGCCGTGT AACGAGCTGG ATCTCATGGG CAATAATTTA
ACTGAGTTGT CAGCAACACT GCCAGACAAC CTGCAAAAAC TGAATGCTTC TTTTAATCAA
CTGCGTACAT TACCGAATAC ATTACCGGCC TCGCTGTTAT CTCTAAATGT GTACAGAAAT
GAACTGGAAC GGCTCCCTGA GCCGCTACCT GAAGGGCTGA AAGAATTAGA CGTTGGTAAT
AATGAGTCAC TGCAACTCCC AAACCGCTGG CCCTCGGTTC TGGAGTCTCT TGGTATTGCA
AACTGTAACT TAGCTGAACT GCCTACACTG CCGAACAGTT TGAAAAAACT GGAGGCGTAT
GGTAATCAAC TGCGCACATT GCCCGAGACA TTGCCAATAT CGCTGTTAAG TTTAAATGTA
ACCGCTAATC AACTCACACA ACTCCCCGAA ACATTGCCCG CCCTTCTGTC ATCTTTACTG
ATATCGAACA ATAGGCTCAC AGCACTACCG GAAAATTTAC CTCGTAGCTT AAGGTGTATC
AGCGCTGAAT ATAATCAATT ACCCCAACTT TCCGACCTGG CCCGTCTGCA CCCAAATTGT
GAAATTATCT TATAA
 
Protein sequence
MNLSNITSHM SMSNIGPDRE IHSDRAAATA LTSADYHAIW EKWASEAITG ADEQRGLAVA 
RMKECLENSA DNLELYGLDL TSLPDILPPC NELDLMGNNL TELSATLPDN LQKLNASFNQ
LRTLPNTLPA SLLSLNVYRN ELERLPEPLP EGLKELDVGN NESLQLPNRW PSVLESLGIA
NCNLAELPTL PNSLKKLEAY GNQLRTLPET LPISLLSLNV TANQLTQLPE TLPALLSSLL
ISNNRLTALP ENLPRSLRCI SAEYNQLPQL SDLARLHPNC EIIL