| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0667 |
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| Symbol | |
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| ID | 5387037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 776623 |
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| End bp | 777813 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640863638 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001399659 |
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| Protein GI | 153948407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCTT TGCGGGCAAA GCAACTCCGC CATTCTTTAC TGTCCCATGC GCTTTTTCTG
CTCATACTCG GGGCGGGCAC TGTGAGTGCG GCCCCCGCGC CTTTACCTGC CGTAACCGTT
GCGGTAGTCG CGTCAATAAC ACCAGACAAT GCCGTGCAAT ATCTTGGGCG GATTGAGGCG
ATTCAAGCGG TTGATGTGAC TACCCGCACC GAAGGATTTA TCGCCCGCCG TCTGTTTACT
GAAGGGAAAA TGGTCAAGCA GGGGGAACTG TTATATGAAA TTGATCCCGC TTTGCATCAA
GCATCGGTGG CGCAAGCACA GGCGCAACTC GACAGCGCGA CTGCCAGCGC CAATCATGCA
CAGGTGAACC TCACGCGTTT ACAACGCTTG GGTAATAACC GTTCTGTCAG CCAGGCGGAG
GTGGATGAAG CACAGGCACA GCGAGATATC AGCCGGGCAG CGGTGGCGCA GGCGCAGGCT
AACCTACAGA TTCAGCAGTT ACAGCTCAGC TTCACCCAAA TTCATGCGCC AATCAGTGGG
CAAATGGGTC ACAGCCGTTT TAATGTGGGC AGCCTGATTA ATCCCGCTAG CGGCACCTTG
GTCAATATTG TGCAGCTCGA TCCGATTCGG GTGGCGATTG CCGTCAATGA ACGGGATTAC
ATTACCGCGA CCTATCAACG CGCCGTCGCC CGTGAAAAAA ACACTGAAAA CCCCTTGCTC
CCTCTGGGGC GTTTTACCCC TCGCATTCAA CTGGCAAATG GTAAGCAATA TCCAGAGAGT
GGTGTTTTTG AATCGGTGGA TAACCAAATT GATAAGCAGA CGGGAACGGT CATTATCCGT
ACTCGTTTTG CCAACCCTCG CCATTTGTTG CTGCCCGGTG GCGTAGTCAA TGTGTCATTG
GCTGCAGACG ACGCCAAGCC TGTGACGGTC ATCCCGATTG CTGCTTTACA ACAGAATAAA
CAGGGCCATT TTGTGCTGGT GGTGACCGAT AAAGCGGTGG TCGAAGTGCG CCCAGTGACC
CTAGGTGAAC AGTTCGAACA GCAATATGCG GTGACAGATG GGGTGAAGGT GGGTGAAAAA
GTCATTGTGG CGGGGCTACA GCATGTCCGA CCGGGTATGG CGGTGAACGC CAGCACGGTT
AATGATGGAA CTGTAAATGA TCGCGTTGCA GCGCCATTGA CGGCTAATTA A
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| Protein sequence | MGPLRAKQLR HSLLSHALFL LILGAGTVSA APAPLPAVTV AVVASITPDN AVQYLGRIEA
IQAVDVTTRT EGFIARRLFT EGKMVKQGEL LYEIDPALHQ ASVAQAQAQL DSATASANHA
QVNLTRLQRL GNNRSVSQAE VDEAQAQRDI SRAAVAQAQA NLQIQQLQLS FTQIHAPISG
QMGHSRFNVG SLINPASGTL VNIVQLDPIR VAIAVNERDY ITATYQRAVA REKNTENPLL
PLGRFTPRIQ LANGKQYPES GVFESVDNQI DKQTGTVIIR TRFANPRHLL LPGGVVNVSL
AADDAKPVTV IPIAALQQNK QGHFVLVVTD KAVVEVRPVT LGEQFEQQYA VTDGVKVGEK
VIVAGLQHVR PGMAVNASTV NDGTVNDRVA APLTAN
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